debian-med Jul 2016 by subject

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Re: [ftpmaster@ftp-master.debian.org: mypy_0.4.1-2_amd64.changes REJECTED]

Michael Crusoe Jul 11
Andreas Tille Jul 11
Michael Crusoe Jul 11
Afif Elghraoui Jul 12

[GSoC] dialign uploaded, new todo list

Andreas Tille Jul 19
Canberk Koç Jul 19

[GSoC] Mummer uploaded, next todo list [Was: GDPC Autopkgtes]

Andreas Tille Jul 27
Canberk Koç Jul 27
Andreas Tille Jul 27
Andreas Tille Jul 27
Canberk Koç Jul 28
Andreas Tille Jul 28
Canberk Koç Jul 28
Andreas Tille Jul 28
Andreas Tille Jul 29
Canberk Koç Jul 29
Andreas Tille Jul 29
Canberk Koç Jul 29
Andreas Tille Jul 29

[GSoC] Next packages (Was: Clustalo Autopkgtests)

Andreas Tille Jul 13

[GSoC] phyml not yet uploaded, new todo list

Andreas Tille Jul 20
Andreas Tille Jul 20

[MoM] What package to start with (Was: Table Information extraction tools in DebianMed?)

Andreas Tille Jul 25
Raony Guimarães Jul 25
Andreas Tille Jul 25
Nikola Milosevic Jul 25
Andreas Tille Jul 25

[outreachy] autopkgtest-pkg-perl in librg-utils-perl does nothing

Andreas Tille Jul 13
merlettaia Jul 13
Andreas Tille Jul 13
Andreas Tille Jul 14
merlettaia Jul 14
merlettaia Jul 16
Andreas Tille Jul 16
Andreas Tille Jul 16

[outreachy] librostlab uploaded

Andreas Tille Jul 13

[outreachy] libtfbs-perl uploaded what about libgo-perl

Andreas Tille Jul 17
merlettaia Jul 17
Andreas Tille Jul 17
merlettaia Jul 17
Andreas Tille Jul 17
merlettaia Jul 18

Re: [Outreachy] predictprotein and other RostLab packages

merlettaia Jul 01
Andreas Tille Jul 01
merlettaia Jul 01
Andreas Tille Jul 01
merlettaia Jul 01
Andreas Tille Jul 02
merlettaia Jul 05
Andreas Tille Jul 05
merlettaia Jul 05
Andreas Tille Jul 05
Andreas Tille Jul 05
merlettaia Jul 08
Andreas Tille Jul 09

[outreachy] profisis uploaded

Andreas Tille Jul 13

[outreachy] profnet uploaded

Andreas Tille Jul 14
merlettaia Jul 14
Andreas Tille Jul 14

[Outreachy] pymol

merlettaia Jul 24
Andreas Tille Jul 24
merlettaia Jul 27
Andreas Tille Jul 27
Andreas Tille Jul 27
Andreas Tille Jul 28

[outreachy] Very good work (Was: r22429 - trunk/packages/rostlab/reprof/trunk/debian)

Andreas Tille Jul 08

Re: [r-cran-rngtools] 01/01: Cleaned debian directory

Alba Crespi Jul 05
Andreas Tille Jul 05

Another Sponsoring request: proftmb

Gert Wollny Jul 04
Andreas Tille Jul 04

Benchmarking adapters

Andreas Tille Jul 28
Olivier Sallou Jul 28

Fwd: Bug#829565: Acknowledgement (ITP: python-dictobj -- python library to access dictionary keys as instance attributes)

Olivier Sallou Jul 04

Bug#831781: ITP: mash -- fast genome and metagenome distance estimation using MinHash

Sascha Steinbiss Jul 19

Re: bx-python

Steffen Möller Jul 02

Fwd: Clustal Omega Release 1.2.2

olivier sallou Jul 04
Andreas Tille Jul 05

Clustalo Autopkgtests

Canberk Koç Jul 12
Andreas Tille Jul 15
Canberk Koç Jul 15

A common test-data package for genome assemblers

Afif Elghraoui Jul 13
Michael Crusoe Jul 13
Andreas Tille Jul 13
Charles Plessy Jul 14
Afif Elghraoui Jul 14
Afif Elghraoui Jul 14
Sascha Steinbiss Jul 14
Afif Elghraoui Jul 16

Re: Could you join the effort to get free source code of fastsimcoal

Andreas Tille Jul 29
Tiago Antão Jul 29
Andreas Tille Jul 29

Re: Daily Report [29.06.16] [GSOC]

Andreas Tille Jul 04
Canberk Koç Jul 04
Canberk Koç Jul 04
Andreas Tille Jul 04
Andreas Tille Jul 11

Description for lefse tools (Was: Origin of data files in MetaPhLan2)

Andreas Tille Jul 27
Andreas Tille Jul 30

Do you have popularity-contest set to yes?

Andreas Tille Jul 11
Sascha Steinbiss Jul 11
Charles Plessy Jul 11
Andreas Tille Jul 11

Re: Doo likee top-grade Girl doingg resplendent blowjoob?

Emilia Clark Jul 12

EBI-ELIXIR and descriptional workflows

Steffen Möller Jul 27

EDFbrowser 1.58 (new version available)

Teunis van Beelen Jul 10
Andreas Tille Jul 10

Embassy phylipnew - please use freely licensed source of phylip

Andreas Tille Jul 25
Peter Rice Jul 26
Andreas Tille Jul 27
Peter Rice Jul 28
Andreas Tille Jul 28

galaxy dependency - current state

Steffen Möller Jul 05

Re: Galaxy project producing their own Debian packages

Michael Crusoe Jul 04
Andreas Tille Jul 04
Olivier Sallou Jul 05
Nate Coraor Jul 05

GDPC Autopkgtes [GSOC]

Canberk Koç Jul 23
Andreas Tille Jul 23
Canberk Koç Jul 24
Andreas Tille Jul 24
Canberk Koç Jul 24
Andreas Tille Jul 24
Canberk Koç Jul 24
Sascha Steinbiss Jul 24
Andreas Tille Jul 24
Sascha Steinbiss Jul 24
Andreas Tille Jul 25
Andreas Tille Jul 25
Canberk Koç Jul 25
Canberk Koç Jul 26

Heads up: bioperl release candidate

Michael Crusoe Jul 07
Andreas Tille Jul 07
Christopher Fields Jul 07
Andreas Tille Jul 07
Charles Plessy Jul 11
Chris Fields Jul 14

Java question: How to query picard-tools for --version

Andreas Tille Jul 28
Olivier Sallou Jul 28
Olivier Sallou Jul 28

linuxbrew with homebrew/science - works!

Steffen Möller Jul 28
Sascha Steinbiss Jul 28
Afif Elghraoui Jul 30
Steffen Möller Jul 31

List of software debuted at ISMB2016

Michael Crusoe Jul 12
Andreas Tille Jul 13

Maintaining non-med packages in other teams (Was: [python-dictobj] branch master created (now 099038b))

Andreas Tille Jul 04

MEGAN finally released under the GPL!

Michael Crusoe Jul 19

metastudent and libgo-perl (Was: [outreachy] autopkgtest-pkg-perl in librg-utils-perl does nothing)

Andreas Tille Jul 14
merlettaia Jul 14
Andreas Tille Jul 14
Andreas Tille Jul 14
merlettaia Jul 17
Andreas Tille Jul 17

Origin of data files in MetaPhLan2

Andreas Tille Jul 25

Re: Orthanc 1.1.0

Sebastien Jodogne Jul 08
Andreas Tille Jul 09
Sebastien Jodogne Jul 11
Sebastien Jodogne Jul 11
Andreas Tille Jul 11

Perprimer quilt patch issue

Canberk Koç Jul 02
Andreas Tille Jul 02
Canberk Koç Jul 02
Andreas Tille Jul 02

Phylip Autopkgtest [GSOC]

Canberk Koç Jul 22
Andreas Tille Jul 22
Canberk Koç Jul 22

pkgmaker copyright

Alba Crespi Jul 04
Renaud Gaujoux Jul 05
Alba Crespi Jul 05

Re: Please choose a free license for eigensoft

Alkes Price Jul 18
Andreas Tille Jul 18
Andreas Tille Jul 19

Re: Please consider a free license for ffp-phylogeny

Andreas Tille Jul 19

Re: Please consider free license for segemehl

Andreas Tille Jul 13

Please help upgrading eigensoft

Andreas Tille Jul 18
merlettaia Jul 19
Tomasz Buchert Jul 19
Andreas Tille Jul 19
Andreas Tille Jul 19
Christian Seiler Jul 19
Leopold Palomo-Avellaneda Jul 19

Re: Please provide source code for Tandem Repeats Finder under a freely redistributable license

Andreas Tille Jul 19

Problems when testing predictprotein (Was: [outreachy] autopkgtest-pkg-perl in librg-utils-perl does nothing)

Andreas Tille Jul 14

Fwd: python-dictobj_0.4-1_amd64.changes ACCEPTED into unstable, unstable

olivier sallou Jul 04

rate4site 3.0.0-3 changes

Sascha Steinbiss Jul 05
Sascha Steinbiss Jul 05

regarding librostlab-blast

Gert Wollny Jul 04
Andreas Tille Jul 05

Regarding sga ...

Gert Wollny Jul 05
Andreas Tille Jul 05

RFS: odil 0.7.1-1

Julien Lamy Jul 12

Seqan2 (Was: Thanks to Gert and Sascha - other please keep on fixing bugs)

Andreas Tille Jul 22
Kevin Murray Jul 22

Sorting our packages into Debian Med or Debian Science tasks

Andreas Tille Jul 28
Sascha Steinbiss Jul 28
Andreas Tille Jul 28

Re: source-only uploads to new (was: Sponsoring request: ITK-4.10 (addendum))

Afif Elghraoui Jul 16

Sponsoring request [RC]: librg-blast-parser-perl

Gert Wollny Jul 22
Andreas Tille Jul 23
Gert Wollny Jul 23

Sponsoring request [RC]: sofa-framework

Gert Wollny Jul 08
Andreas Tille Jul 09

Sponsoring request sitplus 1.0.3 [RC]

Gert Wollny Jul 09
Andreas Tille Jul 10

Sponsoring request: adun.app

Gert Wollny Jul 04
Andreas Tille Jul 04

Sponsoring request: berkeley-express [RC]

Gert Wollny Jul 26
Andreas Tille Jul 26
Andreas Tille Jul 26

Sponsoring request: ITK-4.10

Gert Wollny Jul 12

Re: Sponsoring request: ITK-4.10 (addendum)

Gert Wollny Jul 12
Andreas Tille Jul 13
Gert Wollny Jul 13
Andreas Tille Jul 14
Gert Wollny Jul 14
Andreas Tille Jul 14
Steve M. Robbins Jul 15
Gert Wollny Jul 15

Sponsoring request: mia-2.4.2 -> experimental

Gert Wollny Jul 29
Andreas Tille Jul 29
Gert Wollny Jul 29

Status of seqan

Andreas Tille Jul 20
Michael Crusoe Jul 20
Andreas Tille Jul 20
Michael Crusoe Jul 20
Kevin Murray Jul 20
Andreas Tille Jul 20
Kevin Murray Jul 21

Table Information extraction tools in DebianMed?

Nikola Milosevic Jul 19
Andreas Tille Jul 19
Nikola Milosevic Jul 20
Andreas Tille Jul 20
Sascha Steinbiss Jul 20
Nikola Milosevic Jul 22
Andreas Tille Jul 22

Thanks to Gert and Sascha - other please keep on fixing bugs (Was: Thanks to Sascha for his bug fixing - but we should do more (Was: Strengthening team by fixing other members bugs))

Andreas Tille Jul 22
Gert Wollny Jul 22
Andreas Tille Jul 22
Sascha Steinbiss Jul 22
Kevin Murray Jul 22
Andreas Tille Jul 22

Updates of r-bioc-limma

Andreas Tille Jul 29
Gordon Ball Jul 30
Andreas Tille Jul 30

using `alternatives` for aligners and assemblers and promoting common interfaces

Afif Elghraoui Jul 13
Michael Crusoe Jul 13
Afif Elghraoui Jul 14

Vcftools autopkgtest

Canberk Koç Jul 03
Andreas Tille Jul 03

While we wait for Galaxy, two other F/OSS CWL implementations could be packaged

Michael Crusoe Jul 22

The last update was on 08:20 GMT Sun May 19. There are 250 messages. Page 1 of 1.

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