Re: [MoM] incorporating phyutility into the packages
In that case, I might like to try some other packages. Might try this
one (treePL divergence time analysis for phylogenies) published here
http://www.ncbi.nlm.nih.gov/pubmed/22908216
but will think about it. Also, I see there is a list of packages for
debian as a whole that need help, but is there one for med? I might see
if there are orphaned things that would also be interesting.
Take care,
Stephen
On Tue, Mar 25, 2014 at 06:32:59PM +0100, Andreas Tille wrote:
> Hi Stephen,
>
> On Tue, Mar 25, 2014 at 01:22:19PM -0400, Stephen Smith wrote:
> > > If you would have called `lintian -I -i` it would have told you that
> > > there were some minus signes inside the manpage where hyphens are
> > > expected. Since I was fixing syntactical issues before I did so for now
> > > as well. Just a recommendation to use lintian extensively the next
> > > time.
> >
> > Ah, sorry, I missed that. Still new to that tool. Getting there though.
>
> No problem. You will learn that lintian is one of your best friends when
> trying to prepare policy conform packages.
>
> > > http://code.google.com/p/prottest3/
> > >
> > > (which has some start of packaging here:
> > >
> > > Vcs-Svn: svn://anonscm.debian.org/debian-med/trunk/packages/prottest/trunk/
> > >
> > > and can be moved to Git as well for sure) since the usage of phyutility
> > > inside this tool was my initial motivation to dive into phyutility.
> >
> > Sounds good. I will take that as the next project.
>
> I just ralised that the latest version is not using phyutility any more
> (for whatever reason). Just package it if it is interesting for you.
>
> > I have some other
> > tools that I would love to get in there that have more complex
> > dependencies so it will be good to get more under the belt before then.
>
> Just a warning: prottest has some other binary jars which are not yet
> packaged for Debian and it needs to be sorted out which one are needed
> and thus need to be packaged or whether some of them might be dropped.
>
> > I will go ahead and dive into this.
>
> Feel free to tackle other projects of yours if you might notice that it
> is not as simple as expected and the packages of your own agenda might
> seem more urgent for your personal work.
>
> Kind regards and thanks for your work on phyutility
>
> Andreas.
>
> --
> http://fam-tille.de
>
>
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