Re: python-pysam version lagging

[Charles Plessy <plessy@debian.org>]

Le Tue, Jun 09, 2015 at 11:45:29PM -0700, Afif Elghraoui a écrit :
> 
> From the release notes to version 0.8.2 [1]:
> 
> "Pysam now wraps htslib 1.2.1 and samtools version 1.2"
> 
> samtools in unstable is version 1.1. I marked this version as closing this
> bug, but we should get to updating the samtools package as well, especially
> in case the 1.1/1.2 discrepancy introduces a similar problem.

Hi Afif,

thanks for the heads-up.

I just updated samtools to version 1.2.

I will try to have a look at python-pysam this week, but anybody else
is welcome to be faster than me !

Have a nice day,

Charles

-- 
Charles Plessy
Debian Med packaging team,
http://www.debian.org/devel/debian-med
Tsurumi, Kanagawa, Japan