Re: python-pysam version lagging
Hello,
On الأحد 7 حزيران 2015 19:13, Charles Plessy wrote:
Le Sun, Jun 07, 2015 at 09:27:38PM +0200, Andreas Tille a écrit :
As a general rule: I'm positively convinced that any update in VCS is
more than welcome. Please, if anybody sees some move forward in any
package, just do it. I hope if you ask here for a sponsored update for
Hi Afif,
indeed, you are much welcome to update our packages !
Cheers,
Charles
Thanks, Andreas and Charles; it just looked like someone was in the
middle of something. There were a bunch of changes that were not in the
last upload to unstable, so I thought I should ask first.
In any case, I bumped the upstream version and made some changes to the
packaging. I'm having some trouble with pbuilder/cowbuilder building
this, though. It does not install the build-depends in time, so building
for me fails during the initial "clean" step:
I: pybuild base:170: python3.4 setup.py clean
Traceback (most recent call last):
File "setup.py", line 246, in <module>
from setuptools import Extension, setup
ImportError: No module named 'setuptools'
Do you know how I can fix my pbuilder configuration to handle this
properly? I always get something like the following towards the
beginning of a build:
dpkg-checkbuilddeps: Unmet build dependencies: samtools (>= 0.1.19)
libhts-dev python-all-dev cython python3-all-dev python3-setuptools cython3
dpkg-buildpackage: warning: build dependencies/conflicts unsatisfied;
aborting
dpkg-buildpackage: warning: (Use -d flag to override.)
dpkg-buildpackage: warning: this is currently a non-fatal warning with
-S, but will probably become fatal in the future
If I can get past this problem, I can test it out and finish up the
python-pysam changes. It might be ready now if someone can verify that
the build works and lintian is ok.
Thanks and regards
Afif
--
Afif Elghraoui | عفيف الغراوي
http://afif.ghraoui.name
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