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Re: python-pysam version lagging



Hi Afif,

On Tue, Jun 09, 2015 at 11:45:29PM -0700, Afif Elghraoui wrote:
> >could you please check th eopen bugs of python-pysam
> >whether the patch
> >for #753490 applies to the new version
> 
> ok, I will take a look.

Thanks.
 
> >and even more importantly if the
> >new vesion closes the serious bug #763218.  If this is the case a soon
> >upload would be great.
> >
> 
> From the release notes to version 0.8.2 [1]:
> 
> "Pysam now wraps htslib 1.2.1 and samtools version 1.2"
> 
> samtools in unstable is version 1.1. I marked this version as closing this
> bug, but we should get to updating the samtools package as well, especially
> in case the 1.1/1.2 discrepancy introduces a similar problem.

You know that you (and everybody else reasing this) are free to update
also these packages. ;-)  I for myself can not contribute to this before
22th of June.

> Thanks for pointing this out.

I was motivated by the removal warning[1].

Kind regards

     Andreas.

[1] https://lists.alioth.debian.org/pipermail/debian-med-packaging/2015-June/032442.html

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