Aw: Re: Publication about kclust
> Gesendet: Freitag, 26. Juli 2013 um 10:06 Uhr
> Von: "Laszlo Kajan" <lkajan@rostlab.org>
> An: debian-med@lists.debian.org
> Betreff: Re: Publication about kclust
>
> On 26/07/13 09:57, Olivier Sallou wrote:
> >
> > On 07/26/2013 09:35 AM, Andreas Tille wrote:
> >> Hi,
> >>
> >> inside the source or kclust (just commited by Steffen to SVN) I found
> >>
> >> unpublished, but mentioned in:
> >>
> >> Michael Remmert, Andreas Biegert, Andreas Hauser & Johannes Soeding
> >> HHblits: lighting-fast iterative protein sequence searching by
> >> HMM-HMM alignment
> >> Nature Methods 9, 173-175 (2012)
> >>
> >> which is available here:
> >>
> >> http://www.nature.com/nmeth/journal/v9/n2/abs/nmeth.1818.html
> >>
> >> I'm hesitating a bit to add this publication into debian/upstream
> >> because I'm not sure whether it really fits. What do you think?
> > Well, as article is charged for access, difficult to see what is really
> > in this article. But if it is only a mention of the tool, it should not
> > be put in upstream. This is an other team/author work.
>
> It's the same team. They have not yet been able to publish it. I also considered packaging kclust, but - if I remember well - they told me to
> wait till they publish the tool. Perhaps they gave up.
>
> Yes, the article only mentions kclust, but does not describe it. I can send you a copy of it in private email, of you want, just let me know.
That publication is better than none :) I have not contacted upstream if they are fine with an upload, yet. So far, and this is something I particularly like about the typical workflow for subversion-based packaging, it is only my very own work that I redistribute.
Many greetings
Steffen
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