metaphlan2-data
Hi,
During routine checking, I noticed that a file is missing from
"metaphlan2-data" in "med-bio":
debsums -ac metaphlan2-data
debsums: missing file /var/lib/metaphlan2-data/markers.fasta (from metaphlan2-data package)
The file is present in the metaphlan2-data.deb:
apt download metaphlan2-data
dpkg-deb -Rv metaphlan2-data_2.6.0+ds-3_all.deb metaphlan2-data_2.6.0+ds-3_all
./
./usr/
./usr/sbin/
./usr/sbin/metaphlan2-data-convert
./usr/share/
./usr/share/doc/
./usr/share/doc/metaphlan2-data/
./usr/share/doc/metaphlan2-data/changelog.Debian.gz
./usr/share/doc/metaphlan2-data/copyright
./usr/share/man/
./usr/share/man/man8/
./usr/share/man/man8/metaphlan2-data-convert.8.gz
./var/
./var/lib/
./var/lib/metaphlan2-data/
./var/lib/metaphlan2-data/bt2.md5
./var/lib/metaphlan2-data/markers.fasta
ls -l metaphlan2-data_2.6.0+ds-3_all/var/lib/metaphlan2-data/markers.fasta
-rw-r--r-- 1 root root 771154614 Sep 6 2016 metaphlan2-data_2.6.0+ds-3_all/var/lib/metaphlan2-data/markers.fasta
The manifest has an entry for "markers.fasta", which is why debsums
reports it as a missing file:
fgrep markers.fasta metaphlan2-data_2.6.0+ds-3_all/DEBIAN/md5sums
3f824117b27a052ede59c68c2f1dead4 var/lib/metaphlan2-data/markers.fasta
However, "markers.fasta" is not installed.
I copied the file into place manually because I can't work out why it
isn't installed with the rest of the package?
Any ideas/explanations about why would be apreciated :-)
Thanks,
Tony.
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