debian-med Dec 2020 by thread
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Re: qiime2 status update
Andreas Tille
Re: qiime2 status update
Étienne Mollier
Re: qiime2 status update
Steffen Möller
Re: qiime2 status update
Étienne Mollier
Re: Is there any blockers for shasta upload?
Andreas Tille
Fwd: Re: [qiime2/qiime2] InternalDirectory's rename() will fail on python 3.8 (#520)
Tony Travis
<Possible follow-ups>
Re: [qiime2/qiime2] InternalDirectory's rename() will fail on python 3.8 (#520)
Andreas Tille
[RFS] pplacer
Nilesh Patra
Videoconference tomorrow, Wednesday 2020-12-02 18:00 UTC (Was: For those who want to keep on contributing (Was: Debian @ COVID-19 Biohackathon (April 5-11, 2020))
Andreas Tille
Advent bug squashing party and videoconference today, Thursday 2020-12-17 18:00 UTC (Was: For those who want to keep on contributing (Was: Debian @ COVID-19 Biohackathon (April 5-11, 2020))
Andreas Tille
dh_testroot: error: Package needs targeted root but builder has not provided a gain-root command via ${DEB_GAIN_ROOT_CMD}
Andreas Tille
Re: dh_testroot: error: Package needs targeted root but builder has not provided a gain-root command via ${DEB_GAIN_ROOT_CMD}
Niels Thykier
Re: dh_testroot: error: Package needs targeted root but builder has not provided a gain-root command via ${DEB_GAIN_ROOT_CMD}
Andrey Rahmatullin
[RFS] q2-types 2020.11.0-1
Étienne Mollier
Re: [RFS] q2-types 2020.11.0-1
Étienne Mollier
Re: [RFS] q2-types 2020.11.0-1
Andreas Tille
Re: [RFS] q2-types 2020.11.0-1
Steffen Möller
Re: [RFS] q2-types 2020.11.0-1
Andreas Tille
Re: [RFS] q2-types 2020.11.0-1
Étienne Mollier
Re: [RFS] q2-types 2020.11.0-1
Steffen Möller
Re: [RFS] q2-types 2020.11.0-1
Étienne Mollier
Something for our Advent calendar (Was: Bug#976254: rnahybrid: Does not build from source "multiple definition of")
Andreas Tille
Re: Something for our Advent calendar (Was: Bug#976254: rnahybrid: Does not build from source "multiple definition of")
Hamid Nassiby
RFS: q2-sample-classifier
Steffen Möller
Re: RFS: q2-sample-classifier
Étienne Mollier
Re: RFS: q2-sample-classifier
Steffen Möller
Re: RFS: q2-sample-classifier
Étienne Mollier
Re: RFS: q2-sample-classifier
Steffen Möller
Re: RFS: q2-sample-classifier
Étienne Mollier
Re: RFS: q2-sample-classifier
Nilesh Patra
Re: RFS: q2-sample-classifier
Étienne Mollier
[RFS] q2-metadata 2020.11.0+dfsg-1
Étienne Mollier
Re: [RFS] q2-metadata 2020.11.0+dfsg-1
Étienne Mollier
[RFS] Libnewuoa
Maarten L. Hekkelman
Re: [RFS] Libnewuoa
Andrius Merkys
Re: [RFS] Libnewuoa
Maarten L. Hekkelman
Re: [RFS] Libnewuoa
Andrius Merkys
Re: [RFS] Libnewuoa
Andrius Merkys
Re: [RFS] Libnewuoa
Steffen Möller
Re: [RFS] Libnewuoa
Andrius Merkys
Re: [RFS] Libnewuoa
Maarten L. Hekkelman
Re: [RFS] Libnewuoa
Maarten L. Hekkelman
Re: [RFS] Libnewuoa
Andrius Merkys
Re: [RFS] Libnewuoa
Maarten L. Hekkelman
Re: [RFS] Libnewuoa
Maarten L. Hekkelman
Re: [RFS] Libnewuoa
Andrius Merkys
Re: [RFS] Libnewuoa
Maarten L. Hekkelman
Re: [RFS] Libnewuoa
Andrius Merkys
Is bcbio good to go?
Nilesh Patra
Re: Is bcbio good to go?
Steffen Möller
[Help] Re: jellyfish FTBFS on 32bit
Andreas Tille
Re: [Help] Re: jellyfish FTBFS on 32bit
Nilesh Patra
Re: [COMBINE-lab/RapMap] rapmap v0.6.0
Michael Crusoe
Some more stuf for our advent calendar (Bug#976340: jellyfish: Fails to build on some architectures)
Andreas Tille
Re: Some more stuf for our advent calendar (Bug#976340: jellyfish: Fails to build on some architectures)
Andreas Tille
Bug #974168: bioperl-run: autopkgtest issue fixed, now different build time error
Andreas Tille
Re: [Debian-med-packaging] Bug#974168: Bug #974168: bioperl-run: autopkgtest issue fixed, now different build time error
Étienne Mollier
Re: Bug#974168: Bug#974168: Bug #974168: bioperl-run: autopkgtest issue fixed, now different build time error
Andreas Tille
Re: [Debian-med-packaging] Bug#974168: Bug #974168: bioperl-run: autopkgtest issue fixed, now different build time error
Étienne Mollier
Re: [Debian-med-packaging] Bug#974168: Bug #974168: bioperl-run: autopkgtest issue fixed, now different build time error
Andreas Tille
Re: [Debian-med-packaging] Bug#974168: Bug #974168: bioperl-run: autopkgtest issue fixed, now different build time error
Étienne Mollier
Re: mothur: Removal of sys/sysctl.h
Andreas Tille
Re: mothur: Removal of sys/sysctl.h
Samuel Thibault
Re: mothur: Removal of sys/sysctl.h
John Marshall
Re: mothur: Removal of sys/sysctl.h
Samuel Thibault
move vdjtools from debian-java to debian-med?
tony mancill
Re: move vdjtools from debian-java to debian-med?
Andreas Tille
Re: move vdjtools from debian-java to debian-med?
tony mancill
Re: move vdjtools from debian-java to debian-med?
Andreas Tille
Advent calendar: Help for autopkgtest of librostlab-blast
Andreas Tille
Help for optimir autopkgtest needed
Andreas Tille
Re: Help for optimir autopkgtest needed
Dylan Aïssi
Re: Help for optimir autopkgtest needed
Andreas Tille
Advent calendar bug squashing issue (Was: Bug#936609: cblas / gsl hint needed (Was: Bug#936609: Ported ghmm to Python3 but issues with clapack))
Andreas Tille
Re: Advent calendar bug squashing issue (Was: Bug#936609: cblas / gsl hint needed (Was: Bug#936609: Ported ghmm to Python3 but issues with clapack))
Dirk Eddelbuettel
Re: Advent calendar bug squashing issue (Was: Bug#936609: cblas / gsl hint needed (Was: Bug#936609: Ported ghmm to Python3 but issues with clapack))
Andreas Tille
Bug#936609: cblas / gsl hint needed (Was: Bug#936609: Ported ghmm to Python3 but issues with clapack)
Andreas Tille
RE:Bug#936609: cblas / gsl hint needed (Was: Bug#936609: Ported ghmm to Python3 but issues with clapack)
PICCA Frederic-Emmanuel
[RFS] odil
Nilesh Patra
done Re: [RFS] odil
Steffen Möller
[Review needed] simde fixes for plast
Nilesh Patra
Re: [Review needed] simde fixes for plast
Michael Crusoe
Re: [Review needed] simde fixes for plast
Nilesh Patra
Re: [Review needed] simde fixes for plast
Michael Crusoe
Re: [RFS] tortoize
Maarten L. Hekkelman
Re: [RFS] tortoize
Andreas Tille
Re: [RFS] tortoize
Maarten L. Hekkelman
[RFS] python-biopython 1.78+dfsg-4 (Was: python-biopython_1.78+dfsg-4_source.changes REJECTED)
Étienne Mollier
Re: [RFS] python-biopython 1.78+dfsg-4 (Was: python-biopython_1.78+dfsg-4_source.changes REJECTED)
Steffen Möller
Re: [RFS] python-biopython 1.78+dfsg-4 (Was: python-biopython_1.78+dfsg-4_source.changes REJECTED)
Étienne Mollier
Re: [RFS] python-biopython 1.78+dfsg-4 (Was: python-biopython_1.78+dfsg-4_source.changes REJECTED)
Andreas Tille
Re: [RFS] python-biopython 1.78+dfsg-4 (Was: python-biopython_1.78+dfsg-4_source.changes REJECTED)
Étienne Mollier
[RFS] kmc: arm64 autopkgtest time out
Étienne Mollier
Re: [RFS] kmc: arm64 autopkgtest time out
Paul Gevers
Re: [RFS] kmc: arm64 autopkgtest time out
Étienne Mollier
Re: [RFS] kmc: arm64 autopkgtest time out
Paul Gevers
Re: Bug#954270: [RFS] kmc: arm64 autopkgtest time out
Andreas Tille
Re: Bug#954270: [RFS] kmc: arm64 autopkgtest time out
Paul Gevers
Re: Bug#954270: [RFS] kmc: arm64 autopkgtest time out
Paul Gevers
[RFS] libsis-base-java
Pierre Gruet
Done Re: [RFS] libsis-base-java
Steffen Möller
[Request for help] Bug: #976479 scrappie: FTBFS: scrappie_matrix.h:5:14: fatal error: immintrin.h: No such file or directory
Nilesh Patra
Re: [Request for help] Bug: #976479 scrappie: FTBFS: scrappie_matrix.h:5:14: fatal error: immintrin.h: No such file or directory
Michael Crusoe
Re: [Request for help] Bug: #976479 scrappie: FTBFS: scrappie_matrix.h:5:14: fatal error: immintrin.h: No such file or directory
Nilesh Patra
Re: [Request for help] Bug: #976479 scrappie: FTBFS: scrappie_matrix.h:5:14: fatal error: immintrin.h: No such file or directory
Nilesh Patra
Re: [Request for help] Bug: #976479 scrappie: FTBFS: scrappie_matrix.h:5:14: fatal error: immintrin.h: No such file or directory
Michael Crusoe
Re: [Request for help] Bug: #976479 scrappie: FTBFS: scrappie_matrix.h:5:14: fatal error: immintrin.h: No such file or directory
Michael Crusoe
Re: [Request for help] Bug: #976479 scrappie: FTBFS: scrappie_matrix.h:5:14: fatal error: immintrin.h: No such file or directory
Nilesh Patra
Re: [Request for help] Bug: #976479 scrappie: FTBFS: scrappie_matrix.h:5:14: fatal error: immintrin.h: No such file or directory
Nilesh Patra
Re: [Request for help] Bug: #976479 scrappie: FTBFS: scrappie_matrix.h:5:14: fatal error: immintrin.h: No such file or directory
Michael Crusoe
"Introduction" tab on spreadsheet
Steffen Möller
Re: "Introduction" tab on spreadsheet
Andrius Merkys
Re: "Introduction" tab on spreadsheet
Steffen Möller
routine-update builds twice, but does not clean after the first
Steffen Möller
Re: routine-update builds twice, but does not clean after the first
Nilesh Patra
Re: routine-update builds twice, but does not clean after the first
Steffen Möller
Re: routine-update builds twice, but does not clean after the first
Steffen Möller
Re: routine-update builds twice, but does not clean after the first
Andreas Tille
Re: routine-update builds twice, but does not clean after the first
Andreas Tille
Ants taken over from Neurodebian team but it does not build - any volunteer?
Andreas Tille
Re: Ants taken over from Neurodebian team but it does not build - any volunteer?
Yaroslav Halchenko
Re: Ants taken over from Neurodebian team but it does not build - any volunteer?
Andreas Tille
Re: Ants taken over from Neurodebian team but it does not build - any volunteer?
Julien Lamy
sigviewer: Upstream commits merged in repository on salsa are breaking gbp
Andreas Tille
Re: sigviewer: Upstream commits merged in repository on salsa are breaking gbp
Andreas Tille
[RFS] libpdb-redo
Maarten L. Hekkelman
Re: [RFS] libpdb-redo
Andreas Tille
Re: [RFS] libpdb-redo
Maarten L. Hekkelman
Re: [RFS] libpdb-redo
Andrius Merkys
some bioconductor packages up for peer review
Steffen Möller
q2-dada2 added Re: some bioconductor packages up for peer review
Steffen Möller
Re: some bioconductor packages up for peer review
Andreas Tille
Re: some bioconductor packages up for peer review
Steffen Möller
Re: some bioconductor packages up for peer review
Étienne Mollier
cluster3 dropped out of testing
Diane Trout
Re: cluster3 dropped out of testing
tony mancill
Bugs "fails to migrate to testing for too long" (Was: cluster3 dropped out of testing)
Andreas Tille
Re: Bugs "fails to migrate to testing for too long" (Was: cluster3 dropped out of testing)
Mattia Rizzolo
Re: Bugs "fails to migrate to testing for too long" (Was: cluster3 dropped out of testing)
Diane Trout
Re: Bugs "fails to migrate to testing for too long" (Was: cluster3 dropped out of testing)
Mattia Rizzolo
Re: Bugs "fails to migrate to testing for too long" (Was: cluster3 dropped out of testing)
Diane Trout
Please keep on asking cluster3 upstream to free the code (Was: cluster3 dropped out of testing)
Andreas Tille
Re: Bugs "fails to migrate to testing for too long" (Was: cluster3 dropped out of testing)
tony mancill
Re: Bugs "fails to migrate to testing for too long" (Was: cluster3 dropped out of testing)
Mattia Rizzolo
[RFS] kleborate
Nilesh Patra
done Re: [RFS] kleborate
Steffen Möller
kmc update and options to move forward
Étienne Mollier
Re: kmc update and options to move forward
Andreas Tille
Re: kmc update and options to move forward
Étienne Mollier
[RFS] density-fitness
Maarten L. Hekkelman
[RFS] e-mem 1.0.1-4
Étienne Mollier
Re: [RFS] e-mem 1.0.1-4
Andreas Tille
Free software License for TULIP
Nilesh Patra
Mutual Website Boost?
Rodney at Namecheap
Acquiring Dental RVG on Linux
Sonali Warunjikar
Re: Acquiring Dental RVG on Linux
Karsten Hilbert
Re: Acquiring Dental RVG on Linux
Sonali Warunjikar
Re: Acquiring Dental RVG on Linux
Karsten Hilbert
Re: Acquiring Dental RVG on Linux
Sonali Warunjikar
Aw: Re: Acquiring Dental RVG on Linux
Sebastian Hilbert
Re: Re: Acquiring Dental RVG on Linux
Sonali Warunjikar
Re: Re: Acquiring Dental RVG on Linux
Karsten Hilbert
Re: Re: Acquiring Dental RVG on Linux
Karsten Hilbert
Re: Re: Acquiring Dental RVG on Linux
Sonali Warunjikar
Re: Re: Acquiring Dental RVG on Linux
Karsten Hilbert
Re: Re: Acquiring Dental RVG on Linux
Karsten Hilbert
Re: Acquiring Dental RVG on Linux
Sonali Warunjikar
Re: Acquiring Dental RVG on Linux
Sebastian Hilbert
Re: Acquiring Dental RVG on Linux
Sebastian Hilbert
Re: Acquiring Dental RVG on Linux
Sonali Warunjikar
Re: Acquiring Dental RVG on Linux
Sebastian Hilbert
Re: Acquiring Dental RVG on Linux
Sonali Warunjikar
Re: Acquiring Dental RVG on Linux
Sonali Warunjikar
Re: Acquiring Dental RVG on Linux
Sebastian Hilbert
Re: Acquiring Dental RVG on Linux
Karsten Hilbert
Re: Acquiring Dental RVG on Linux
Sonali Warunjikar
Re: Acquiring Dental RVG on Linux
Karsten Hilbert
Re: Acquiring Dental RVG on Linux
Sonali Warunjikar
Re: Acquiring Dental RVG on Linux
Sonali Warunjikar
Re: Acquiring Dental RVG on Linux
Sebastian Hilbert
Re: Acquiring Dental RVG on Linux
Sonali Warunjikar
Re: Acquiring Dental RVG on Linux
Karsten Hilbert
Re: Acquiring Dental RVG on Linux
Sonali Warunjikar
Re: Acquiring Dental RVG on Linux
Sonali Warunjikar
Re: Acquiring Dental RVG on Linux
Sonali Warunjikar
Re: Acquiring Dental RVG on Linux
Sonali Warunjikar
Re: Acquiring Dental RVG on Linux
Sebastian Hilbert
Re: Acquiring Dental RVG on Linux
Sonali Warunjikar
Re: Acquiring Dental RVG on Linux
Sebastian Hilbert
Re: Acquiring Dental RVG on Linux
Sonali Warunjikar
Re: Acquiring Dental RVG on Linux
Sebastian Hilbert
Re: Acquiring Dental RVG on Linux
Sonali Warunjikar
Re: Acquiring Dental RVG on Linux
Sebastian Hilbert
Re: Acquiring Dental RVG on Linux
Sonali Warunjikar
Re: Acquiring Dental RVG on Linux
Sebastian Hilbert
Re: Acquiring Dental RVG on Linux
Sebastian Hilbert
Re: Acquiring Dental RVG on Linux
Karsten Hilbert
Re: Acquiring Dental RVG on Linux
Sonali Warunjikar
Re: Acquiring Dental RVG on Linux
Sonali Warunjikar
Re: Acquiring Dental RVG on Linux
Sonali Warunjikar
Re: Acquiring Dental RVG on Linux
Karsten Hilbert
Re: Acquiring Dental RVG on Linux
Sonali Warunjikar
Re: Acquiring Dental RVG on Linux
Sebastian Hilbert
Re: Acquiring Dental RVG on Linux
Sonali Warunjikar
Re: Acquiring Dental RVG on Linux
Karsten Hilbert
Re: Acquiring Dental RVG on Linux
Sebastian Hilbert
Re: Acquiring Dental RVG on Linux
Sebastian Hilbert
Re: Acquiring Dental RVG on Linux
Sonali Warunjikar
Re: Acquiring Dental RVG on Linux
Sonali Warunjikar
Re: Acquiring Dental RVG on Linux
Karsten Hilbert
Re: Acquiring Dental RVG on Linux
Sonali Warunjikar
Re: Acquiring Dental RVG on Linux
Sebastian Hilbert
Re: Acquiring Dental RVG on Linux
Sonali Warunjikar
Re: Acquiring Dental RVG on Linux
Karsten Hilbert
Re: Acquiring Dental RVG on Linux
Sonali Warunjikar
Re: Acquiring Dental RVG on Linux
Karsten Hilbert
Re: Acquiring Dental RVG on Linux
Sonali Warunjikar
Re: Acquiring Dental RVG on Linux
Sonali Warunjikar
Re: Acquiring Dental RVG on Linux
Sonali Warunjikar
Re: Acquiring Dental RVG on Linux
Sebastian Hilbert
Re: Acquiring Dental RVG on Linux
Sonali Warunjikar
Aw: Re: Acquiring Dental RVG on Linux
Karsten Hilbert
Re: Re: Acquiring Dental RVG on Linux
Sonali Warunjikar
Re: Acquiring Dental RVG on Linux
Aaron M. Ucko
Re: Acquiring Dental RVG on Linux
Sonali Warunjikar
Re: Acquiring Dental RVG on Linux
Aaron M. Ucko
Re: Acquiring Dental RVG on Linux
Sebastian Hilbert
Re: Acquiring Dental RVG on Linux
Sonali Warunjikar
Re: Acquiring Dental RVG on Linux
Sebastian Hilbert
Re: Acquiring Dental RVG on Linux
Sonali Warunjikar
Re: Acquiring Dental RVG on Linux
Sonali Warunjikar
Re: Acquiring Dental RVG on Linux
Sebastian Hilbert
Re: Acquiring Dental RVG on Linux
Sonali Warunjikar
[RFS] python-pyfaidx
Nilesh Patra
done Re: [RFS] python-pyfaidx
Steffen Möller
[RFS] ivar 1.3+dfsg-1
Étienne Mollier
Re: [RFS] ivar 1.3+dfsg-1
tony mancill
libpdb-redo, update
Maarten L. Hekkelman
Re: libpdb-redo, update
Andrius Merkys
GPU support in BART
Uecker, Martin
Re: GPU support in BART
Andreas Tille
Re: GPU support in BART
Uecker, Martin
[RFS] cat-bat
Nilesh Patra
Re: [RFS] cat-bat
Andreas Tille
dpkg-shlibdeps: error: cannot find library (Was: Bug#977308: shasta: hardcoded dependencies on boost 1.71)
Andreas Tille
Re: dpkg-shlibdeps: error: cannot find library (Was: Bug#977308: shasta: hardcoded dependencies on boost 1.71)
Andrey Rahmatullin
Re: dpkg-shlibdeps: error: cannot find library (Was: Bug#977308: shasta: hardcoded dependencies on boost 1.71)
Andreas Tille
Re: dpkg-shlibdeps: error: cannot find library (Was: Bug#977308: shasta: hardcoded dependencies on boost 1.71)
Andrey Rahmatullin
Re: dpkg-shlibdeps: error: cannot find library (Was: Bug#977308: shasta: hardcoded dependencies on boost 1.71)
Jeremy Sowden
Re: dpkg-shlibdeps: error: cannot find library (Was: Bug#977308: shasta: hardcoded dependencies on boost 1.71)
Andreas Tille
Packages in non-free can be autobuilt
Adrian Bunk
Should we standardize a way to create and maintain manpages?
Nilesh Patra
Re: Should we standardize a way to create and maintain manpages?
Andrius Merkys
Re: Should we standardize a way to create and maintain manpages?
Nilesh Patra
Re: Should we standardize a way to create and maintain manpages?
Andrius Merkys
Re: Should we standardize a way to create and maintain manpages?
rhkramer
Re: Should we standardize a way to create and maintain manpages?
Andreas Tille
Re: Should we standardize a way to create and maintain manpages?
Andrius Merkys
Re: Should we standardize a way to create and maintain manpages?
olivier sallou
Re: Should we standardize a way to create and maintain manpages?
Andrius Merkys
Re: Should we standardize a way to create and maintain manpages?
Andreas Tille
Re: Should we standardize a way to create and maintain manpages?
Andrius Merkys
Re: Should we standardize a way to create and maintain manpages?
Andrius Merkys
Analysis Takes forever and times out on i386
Nilesh Patra
Message not available
Re: [last-align] Analysis Takes forever and times out on i386
Nilesh Patra
Re: Bug#962675: can cdbfasta be marked Multi-Arch: foreign?
Helmut Grohne
[RFS] flexbar
Nilesh Patra
Re: [RFS] flexbar
Andreas Tille
Salsa CI for all med-team packages?
Nilesh Patra
Re: Salsa CI for all med-team packages?
Andrius Merkys
Re: Salsa CI for all med-team packages?
Nilesh Patra
Re: Salsa CI for all med-team packages?
Andreas Tille
Re: Salsa CI for all med-team packages?
Nilesh Patra
Re: Salsa CI for all med-team packages?
Andreas Tille
Re: Salsa CI for all med-team packages?
Andrius Merkys
Re: Salsa CI for all med-team packages?
Andreas Tille
[RFS] python-nanomath
Nilesh Patra
Re: [RFS] python-nanomath
tony mancill
[RFS] crac
Nilesh Patra
Re: [RFS] crac
tony mancill
[RFS] jmodeltest
Nilesh Patra
Re: [RFS] jmodeltest
tony mancill
[RFS] brian
Nilesh Patra
Re: [RFS] brian
Andreas Tille
[RFS] swissknife
Nilesh Patra
Re: [RFS] swissknife
Andreas Tille
[RFS] mummer
Nilesh Patra
Re: [RFS] mummer
tony mancill
metaphlan2-data
Tony Travis
<Possible follow-ups>
metaphlan2-data
Tony Travis
Cannot install libinsight4-dev
Gregory Sharp
Re: Cannot install libinsight4-dev
Andreas Tille
Re: Cannot install libinsight4-dev
Antoni Villalonga
Re: Cannot install libinsight4-dev
Antoni Villalonga
Re: Cannot install libinsight4-dev
Andreas Tille
Re: Cannot install libinsight4-dev
Antoni Villalonga
Re: Cannot install libinsight4-dev
Andreas Tille
The last update was on 20:00 GMT Thu Dec 31. There are 297 messages. Page 1 of 1.
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