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Re: Failing tests / OnFire



Hi Saira,

On Fri, Aug 02, 2019 at 02:43:28PM +0100, Saira Hussain wrote:
> > Very cool that you now gained a speed that is probably real fun for
> > yourself.  I'm really happy that you gained the experience that you can
> > reach positive results in a short times!  To bad that we picked those
> > hard ones first. :-(
> Yes! I do much more enjoy now. But fear not. I think it was a great
> experience as I learned much more than I would have if I just used the
> included tests!

That's true for sure.
 
> Also I will be very happy to use this knowledge and help further with more
> packages after the end of the internship (although I am getting a month
> break before I am back :)

Just do the break you need.  I'd be really happy if you would become a
valuable member of our small team to make bioinformatics with free
software even better. 

BTW, I missed to send an updated list of potential packages in need of
a test:


                  source                  | vote |
------------------------------------------+------+
 anfo                                     |    7 |
 cain                                     |    7 |
 diamond-aligner                          |    7 | https://github.com/bbuchfink/diamond/issues/295: a test suite is planned and should be ready soon.
 dnaclust                                 |    7 |
 freecontact                              |    7 |
 king-probe                               |    7 |
 tree-puzzle                              |    7 | Be aware that this is complex due to errors even at build time
 fastlink                                 |    6 |
 idba                                     |    6 |
 kissplice                                |    6 |
 loki                                     |    6 | Dead upstream / missing from internet but continuosly used
 maqview                                  |    6 |
 mauve-aligner                            |    6 |
 paml                                     |    6 |


Just pick whatever you prefer once you are finished with hisat2.
(I'm just afraid your speed is high enough to wait for more input
when I'm offline tomorrow ;-) )

Kind regards

      Andreas.

-- 
http://fam-tille.de


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