Re: CI for fastx-toolkit [Outreachy]

To: debian-med@lists.debian.org
Subject: Re: CI for fastx-toolkit [Outreachy]
From: Andreas Tille <andreas@an3as.eu>
Date: Tue, 6 Jun 2017 09:57:43 +0200
Message-id: <[🔎] 20170606075743.GE17378@an3as.eu>
In-reply-to: <[🔎] CAGH0+srWdUeORuP8NaNSQYjBgAM_7Qv0uvO9wxF2YtTH+gaH4Q@mail.gmail.com>
References: <[🔎] CAGH0+srBwDGfn6yLwoKK0aVBVPdrBhy1TiAYrB-F0DJVeS46RQ@mail.gmail.com> <[🔎] 20170606002143.GC15058@falafel.plessy.net> <[🔎] CAGH0+srWdUeORuP8NaNSQYjBgAM_7Qv0uvO9wxF2YtTH+gaH4Q@mail.gmail.com>

Hi Nadiya,

I tried the run-unit-test script and got:

$ . /usr/share/doc/fastx-toolkit/run-unit-test 
testing fastq_to_fasta
testing fastx_quality_stats
testing fastx_clipper
testing fastx_renamer
testing fastx_trimmer
testing fastx_collapser
testing fastx_artifacts_filter
testing fastq_quality_filter
incorrect result

This is the case when running under Jessie and Stretch.  Do you have any
clue why the test is failing?

Kind regards

       Andreas.

-- 
http://fam-tille.de

Reply to:

Follow-Ups:
- Re: CI for fastx-toolkit [Outreachy]
  - From: Nadiya Sitdykova <rovenskasa@gmail.com>

References:
- CI for fastx-toolkit [Outreachy]
  - From: Nadiya Sitdykova <rovenskasa@gmail.com>
- Re: CI for fastx-toolkit [Outreachy]
  - From: Charles Plessy <plessy@debian.org>
- Re: CI for fastx-toolkit [Outreachy]
  - From: Nadiya Sitdykova <rovenskasa@gmail.com>

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