Re: [python-pysam] - 4 packages built and all lintian clean

[Charles Plessy <plessy@debian.org>]

Hi all,

I had a look at python-pysam, and I removed the python3-pysam-tests, which
contained the same upstream test suite as in python-pysam-tests.

Unfortunatly, running this test suite via autopkgtest (sadt) fails
with the following error:

E: ======================================================================
E: ERROR: testCount (compile_test.BAMTest)
E: ----------------------------------------------------------------------
E: Traceback (most recent call last):
E:   File "/tmp/sadt.wy39mce7/compile_test.py", line 32, in testCount
E:     pysam.Samfile(self.input_filename))
E:   File "pysam/calignmentfile.pyx", line 302, in pysam.calignmentfile.AlignmentFile.__cinit__ (pysam/calignmentfile.c:4754)
E:   File "pysam/calignmentfile.pyx", line 336, in pysam.calignmentfile.AlignmentFile._open (pysam/calignmentfile.c:5356)
E:   File "pysam/calignmentfile.pyx", line 451, in pysam.calignmentfile.AlignmentFile._open (pysam/calignmentfile.c:6527)
E: OSError: file `b'pysam_data/ex1.bam'` not found
E: 

I have spent up my time budget for today, but if someobdy can have a look, that
would be great.

Have a nice day,

-- 
Charles