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Ginkgo-CADx compilation problem form Debian package



Hi,

 

I saw that Ginkgo-CADx is packaged in experimental. I tried to compile it for Ubuntu 12.10 locally (dget -xu, debuild -B) and get the following output. I guess there are some different versions for the dependencies. Any pointer (what to research) would be appreciated.

 

libdcmtk2:

Installed: 3.6.0-11build1

Candidate: 3.6.0-11build1

Version table:

*** 3.6.0-11build1 0

500 http://archive.ubuntu.com/ubuntu/ quantal/universe i386 Packages

100 /var/lib/dpkg/status

 

/usr/bin/c++ -fPIC -pthread -g -O2 -fstack-protector --param=ssp-buffer-size=4 -Wformat -Werror=format-security -D_FORTIFY_SOURCE=2 -Wl,-Bsymbolic-functions -Wl,-z,relro -Wl,--as-needed CMakeFiles/ginkgocadx.dir/main.cpp.o -o ginkgocadx -rdynamic -L/home/basti/Sources/ubuntu-packages/ginkgo-cadx/ginkgocadx-3.2.0.634.25/src/../lib/Linux-x86/libcurl-7.28.1/lib/release -L/usr/lib/InsightToolkit ../cadxcore/libCADxCore.a ../visualizator/libvisualizator.a -ldcmdata -ldcmimage -ldcmimgle -ldcmjpeg -ldcmnet -ldcmpstat -ldcmqrdb -ldcmsr -ldcmtls -lijg12 -lijg16 -lijg8 -lofstd -loflog -ldcmdsig -ldcmtls -lwrap ../cadxcore/libCADxCore.a -lcurl -ldcmdata -ldcmimage -ldcmimgle -ldcmjpeg -ldcmnet -ldcmpstat -ldcmqrdb -ldcmsr -ldcmtls -lijg12 -lijg16 -lijg8 -lofstd -lsqlite3 -lfreetype -lglib-2.0 -lgobject-2.0 -lgdk_pixbuf-2.0 -lgdk-x11-2.0 -lgtk-x11-2.0 -lcairo -lpango-1.0 -latk-1.0 -lssl -lcrypto -L/usr/lib/i386-linux-gnu -pthread -lwx_gtk2u_core-2.8 -lwx_baseu-2.8 -lwx_gtk2u_gl-2.8 -lwx_baseu_net-2.8 -lwx_baseu_xml-2.8 -lwx_gtk2u_aui-2.8 -lwx_gtk2u_adv-2.8 -lwx_gtk2u_richtext-2.8 -lwx_gtk2u_xrc-2.8 /usr/lib/libvtkGenericFiltering.so.5.8.0 /usr/lib/libvtkGeovis.so.5.8.0 /usr/lib/libvtkCharts.so.5.8.0 /usr/lib/libvtkViews.so.5.8.0 /usr/lib/libvtkInfovis.so.5.8.0 /usr/lib/libvtkWidgets.so.5.8.0 /usr/lib/libvtkVolumeRendering.so.5.8.0 /usr/lib/libvtkHybrid.so.5.8.0 /usr/lib/libvtkParallel.so.5.8.0 /usr/lib/libvtkRendering.so.5.8.0 /usr/lib/libvtkImaging.so.5.8.0 /usr/lib/libvtkGraphics.so.5.8.0 /usr/lib/libvtkIO.so.5.8.0 /usr/lib/libvtkFiltering.so.5.8.0 /usr/lib/libvtkCommon.so.5.8.0 /usr/lib/libvtksys.so.5.8.0 -lITKAlgorithms -lITKNumerics -lfftw3 -lfftw3_threads -lfftw3f -lfftw3f_threads -lITKStatistics -litkNetlibSlatec -lITKFEM -lITKBasicFilters -lITKIO -lITKNrrdIO -lgdcmMSFF -litkjpeg8 -lpng -ltiff -lITKSpatialObject -lITKMetaIO -lITKDICOMParser -lITKEXPAT -lITKniftiio -lITKznz -lz -lITKTransformIOReview -lITKQuadEdgeMesh -lITKCommon -litkvnl_inst -litkvnl_algo -litkv3p_netlib -litkvnl -litkvcl -litkv3p_lsqr -lm -litksys -lpthread -lm -ldl -lGL -lxml2 -lwrap -Wl,-rpath,/home/basti/Sources/ubuntu-packages/ginkgo-cadx/ginkgocadx-3.2.0.634.25/src/../lib/Linux-x86/libcurl-7.28.1/lib/release:/usr/lib/InsightToolkit:/usr/lib/openmpi/lib: -Wl,-rpath-link,/usr/lib/openmpi/lib

/usr/lib/gcc/i686-linux-gnu/4.7/../../../../lib/libdcmsr.so: undefined reference to `xmlFree'

/usr/lib/gcc/i686-linux-gnu/4.7/../../../../lib/libdcmsr.so: undefined reference to `xmlSetGenericErrorFunc'

/usr/lib/gcc/i686-linux-gnu/4.7/../../../../lib/libdcmsr.so: undefined reference to `xmlNodeGetContent'

/usr/lib/gcc/i686-linux-gnu/4.7/../../../../lib/libdcmsr.so: undefined reference to `xmlBufferContent'

/usr/lib/gcc/i686-linux-gnu/4.7/../../../../lib/libdcmsr.so: undefined reference to `xmlSchemaNewValidCtxt'

/usr/lib/gcc/i686-linux-gnu/4.7/../../../../lib/libdcmsr.so: undefined reference to `__xmlGetWarningsDefaultValue'

/usr/lib/gcc/i686-linux-gnu/4.7/../../../../lib/libdcmsr.so: undefined reference to `xmlSchemaSetValidErrors'

/usr/lib/gcc/i686-linux-gnu/4.7/../../../../lib/libdcmsr.so: undefined reference to `xmlSearchNsByHref'

/usr/lib/gcc/i686-linux-gnu/4.7/../../../../lib/libdcmsr.so: undefined reference to `__xmlGenericErrorContext'

/usr/lib/gcc/i686-linux-gnu/4.7/../../../../lib/libdcmsr.so: undefined reference to `xmlFindCharEncodingHandler'

/usr/lib/gcc/i686-linux-gnu/4.7/../../../../lib/libdcmsr.so: undefined reference to `xmlSchemaSetParserErrors'

/usr/lib/gcc/i686-linux-gnu/4.7/../../../../lib/libdcmsr.so: undefined reference to `xmlFreeDoc'

/usr/lib/gcc/i686-linux-gnu/4.7/../../../../lib/libdcmsr.so: undefined reference to `xmlSchemaFree'

/usr/lib/gcc/i686-linux-gnu/4.7/../../../../lib/libdcmsr.so: undefined reference to `xmlSchemaParse'

/usr/lib/gcc/i686-linux-gnu/4.7/../../../../lib/libdcmsr.so: undefined reference to `xmlParseFile'

/usr/lib/gcc/i686-linux-gnu/4.7/../../../../lib/libdcmsr.so: undefined reference to `xmlSchemaFreeValidCtxt'

/usr/lib/gcc/i686-linux-gnu/4.7/../../../../lib/libdcmsr.so: undefined reference to `xmlIsBlankNode'

/usr/lib/gcc/i686-linux-gnu/4.7/../../../../lib/libdcmsr.so: undefined reference to `xmlLineNumbersDefault'

/usr/lib/gcc/i686-linux-gnu/4.7/../../../../lib/libdcmsr.so: undefined reference to `xmlDocGetRootElement'

/usr/lib/gcc/i686-linux-gnu/4.7/../../../../lib/libdcmsr.so: undefined reference to `xmlBufferFree'

/usr/lib/gcc/i686-linux-gnu/4.7/../../../../lib/libdcmsr.so: undefined reference to `__xmlGenericError'

/usr/lib/gcc/i686-linux-gnu/4.7/../../../../lib/libdcmsr.so: undefined reference to `xmlBufferCat'

/usr/lib/gcc/i686-linux-gnu/4.7/../../../../lib/libdcmsr.so: undefined reference to `xmlSchemaValidateDoc'

/usr/lib/gcc/i686-linux-gnu/4.7/../../../../lib/libdcmsr.so: undefined reference to `xmlSchemaFreeParserCtxt'

/usr/lib/gcc/i686-linux-gnu/4.7/../../../../lib/libdcmsr.so: undefined reference to `xmlCharEncOutFunc'

/usr/lib/gcc/i686-linux-gnu/4.7/../../../../lib/libdcmsr.so: undefined reference to `xmlHasProp'

/usr/lib/gcc/i686-linux-gnu/4.7/../../../../lib/libdcmsr.so: undefined reference to `xmlStrcmp'

/usr/lib/gcc/i686-linux-gnu/4.7/../../../../lib/libdcmsr.so: undefined reference to `xmlStrlen'

/usr/lib/gcc/i686-linux-gnu/4.7/../../../../lib/libdcmsr.so: undefined reference to `xmlSubstituteEntitiesDefault'

/usr/lib/gcc/i686-linux-gnu/4.7/../../../../lib/libdcmsr.so: undefined reference to `xmlBufferCreate'

/usr/lib/gcc/i686-linux-gnu/4.7/../../../../lib/libdcmsr.so: undefined reference to `xmlSchemaNewParserCtxt'

/usr/lib/gcc/i686-linux-gnu/4.7/../../../../lib/libdcmsr.so: undefined reference to `xmlGetProp'

collect2: error: ld returned 1 exit status

make[3]: *** [ginkgocadx/ginkgocadx] Error 1

make[3]: Leaving directory `/home/basti/Sources/ubuntu-packages/ginkgo-cadx/ginkgocadx-3.2.0.634.25/obj-i686-linux-gnu'

make[2]: *** [ginkgocadx/CMakeFiles/ginkgocadx.dir/all] Error 2

make[2]: Leaving directory `/home/basti/Sources/ubuntu-packages/ginkgo-cadx/ginkgocadx-3.2.0.634.25/obj-i686-linux-gnu'

make[1]: *** [all] Error 2

make[1]: Leaving directory `/home/basti/Sources/ubuntu-packages/ginkgo-cadx/ginkgocadx-3.2.0.634.25/obj-i686-linux-gnu'

dh_auto_build: make -j1 returned exit code 2

make: *** [build-arch] Error 2

dpkg-buildpackage: error: debian/rules build-arch gave error exit status 2

debuild: fatal error at line 1357:

dpkg-buildpackage -rfakeroot -D -us -uc -B failed

 

Sebastian


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