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Re: Ginkgo-CADx compilation problem form Debian package

I would use the latest package of dcmtk. It will pull in the missing
shared libs.

On Thu, Apr 11, 2013 at 10:43 AM, Sebastian Hilbert
<sebastian.hilbert@gmx.net> wrote:
> Hi,
>
>
>
> I saw that Ginkgo-CADx is packaged in experimental. I tried to compile it
> for Ubuntu 12.10 locally (dget -xu, debuild -B) and get the following
> output. I guess there are some different versions for the dependencies. Any
> pointer (what to research) would be appreciated.
>
>
>
> libdcmtk2:
>
> Installed: 3.6.0-11build1
>
> Candidate: 3.6.0-11build1
>
> Version table:
>
> *** 3.6.0-11build1 0
>
> 500 http://archive.ubuntu.com/ubuntu/ quantal/universe i386 Packages
>
> 100 /var/lib/dpkg/status
>
>
>
> /usr/bin/c++ -fPIC -pthread -g -O2 -fstack-protector
> --param=ssp-buffer-size=4 -Wformat -Werror=format-security
> -D_FORTIFY_SOURCE=2 -Wl,-Bsymbolic-functions -Wl,-z,relro -Wl,--as-needed
> CMakeFiles/ginkgocadx.dir/main.cpp.o -o ginkgocadx -rdynamic
> -L/home/basti/Sources/ubuntu-packages/ginkgo-cadx/ginkgocadx-3.2.0.634.25/src/../lib/Linux-x86/libcurl-7.28.1/lib/release
> -L/usr/lib/InsightToolkit ../cadxcore/libCADxCore.a
> ../visualizator/libvisualizator.a -ldcmdata -ldcmimage -ldcmimgle -ldcmjpeg
> -ldcmnet -ldcmpstat -ldcmqrdb -ldcmsr -ldcmtls -lijg12 -lijg16 -lijg8
> -lofstd -loflog -ldcmdsig -ldcmtls -lwrap ../cadxcore/libCADxCore.a -lcurl
> -ldcmdata -ldcmimage -ldcmimgle -ldcmjpeg -ldcmnet -ldcmpstat -ldcmqrdb
> -ldcmsr -ldcmtls -lijg12 -lijg16 -lijg8 -lofstd -lsqlite3 -lfreetype
> -lglib-2.0 -lgobject-2.0 -lgdk_pixbuf-2.0 -lgdk-x11-2.0 -lgtk-x11-2.0
> -lcairo -lpango-1.0 -latk-1.0 -lssl -lcrypto -L/usr/lib/i386-linux-gnu
> -pthread -lwx_gtk2u_core-2.8 -lwx_baseu-2.8 -lwx_gtk2u_gl-2.8
> -lwx_baseu_net-2.8 -lwx_baseu_xml-2.8 -lwx_gtk2u_aui-2.8 -lwx_gtk2u_adv-2.8
> -lwx_gtk2u_richtext-2.8 -lwx_gtk2u_xrc-2.8
> /usr/lib/libvtkGenericFiltering.so.5.8.0 /usr/lib/libvtkGeovis.so.5.8.0
> /usr/lib/libvtkCharts.so.5.8.0 /usr/lib/libvtkViews.so.5.8.0
> /usr/lib/libvtkInfovis.so.5.8.0 /usr/lib/libvtkWidgets.so.5.8.0
> /usr/lib/libvtkVolumeRendering.so.5.8.0 /usr/lib/libvtkHybrid.so.5.8.0
> /usr/lib/libvtkParallel.so.5.8.0 /usr/lib/libvtkRendering.so.5.8.0
> /usr/lib/libvtkImaging.so.5.8.0 /usr/lib/libvtkGraphics.so.5.8.0
> /usr/lib/libvtkIO.so.5.8.0 /usr/lib/libvtkFiltering.so.5.8.0
> /usr/lib/libvtkCommon.so.5.8.0 /usr/lib/libvtksys.so.5.8.0 -lITKAlgorithms
> -lITKNumerics -lfftw3 -lfftw3_threads -lfftw3f -lfftw3f_threads
> -lITKStatistics -litkNetlibSlatec -lITKFEM -lITKBasicFilters -lITKIO
> -lITKNrrdIO -lgdcmMSFF -litkjpeg8 -lpng -ltiff -lITKSpatialObject
> -lITKMetaIO -lITKDICOMParser -lITKEXPAT -lITKniftiio -lITKznz -lz
> -lITKTransformIOReview -lITKQuadEdgeMesh -lITKCommon -litkvnl_inst
> -litkvnl_algo -litkv3p_netlib -litkvnl -litkvcl -litkv3p_lsqr -lm -litksys
> -lpthread -lm -ldl -lGL -lxml2 -lwrap
> -Wl,-rpath,/home/basti/Sources/ubuntu-packages/ginkgo-cadx/ginkgocadx-3.2.0.634.25/src/../lib/Linux-x86/libcurl-7.28.1/lib/release:/usr/lib/InsightToolkit:/usr/lib/openmpi/lib:
> -Wl,-rpath-link,/usr/lib/openmpi/lib
>
> /usr/lib/gcc/i686-linux-gnu/4.7/../../../../lib/libdcmsr.so: undefined
> reference to `xmlFree'
>
> /usr/lib/gcc/i686-linux-gnu/4.7/../../../../lib/libdcmsr.so: undefined
> reference to `xmlSetGenericErrorFunc'
>
> /usr/lib/gcc/i686-linux-gnu/4.7/../../../../lib/libdcmsr.so: undefined
> reference to `xmlNodeGetContent'
>
> /usr/lib/gcc/i686-linux-gnu/4.7/../../../../lib/libdcmsr.so: undefined
> reference to `xmlBufferContent'
>
> /usr/lib/gcc/i686-linux-gnu/4.7/../../../../lib/libdcmsr.so: undefined
> reference to `xmlSchemaNewValidCtxt'
>
> /usr/lib/gcc/i686-linux-gnu/4.7/../../../../lib/libdcmsr.so: undefined
> reference to `__xmlGetWarningsDefaultValue'
>
> /usr/lib/gcc/i686-linux-gnu/4.7/../../../../lib/libdcmsr.so: undefined
> reference to `xmlSchemaSetValidErrors'
>
> /usr/lib/gcc/i686-linux-gnu/4.7/../../../../lib/libdcmsr.so: undefined
> reference to `xmlSearchNsByHref'
>
> /usr/lib/gcc/i686-linux-gnu/4.7/../../../../lib/libdcmsr.so: undefined
> reference to `__xmlGenericErrorContext'
>
> /usr/lib/gcc/i686-linux-gnu/4.7/../../../../lib/libdcmsr.so: undefined
> reference to `xmlFindCharEncodingHandler'
>
> /usr/lib/gcc/i686-linux-gnu/4.7/../../../../lib/libdcmsr.so: undefined
> reference to `xmlSchemaSetParserErrors'
>
> /usr/lib/gcc/i686-linux-gnu/4.7/../../../../lib/libdcmsr.so: undefined
> reference to `xmlFreeDoc'
>
> /usr/lib/gcc/i686-linux-gnu/4.7/../../../../lib/libdcmsr.so: undefined
> reference to `xmlSchemaFree'
>
> /usr/lib/gcc/i686-linux-gnu/4.7/../../../../lib/libdcmsr.so: undefined
> reference to `xmlSchemaParse'
>
> /usr/lib/gcc/i686-linux-gnu/4.7/../../../../lib/libdcmsr.so: undefined
> reference to `xmlParseFile'
>
> /usr/lib/gcc/i686-linux-gnu/4.7/../../../../lib/libdcmsr.so: undefined
> reference to `xmlSchemaFreeValidCtxt'
>
> /usr/lib/gcc/i686-linux-gnu/4.7/../../../../lib/libdcmsr.so: undefined
> reference to `xmlIsBlankNode'
>
> /usr/lib/gcc/i686-linux-gnu/4.7/../../../../lib/libdcmsr.so: undefined
> reference to `xmlLineNumbersDefault'
>
> /usr/lib/gcc/i686-linux-gnu/4.7/../../../../lib/libdcmsr.so: undefined
> reference to `xmlDocGetRootElement'
>
> /usr/lib/gcc/i686-linux-gnu/4.7/../../../../lib/libdcmsr.so: undefined
> reference to `xmlBufferFree'
>
> /usr/lib/gcc/i686-linux-gnu/4.7/../../../../lib/libdcmsr.so: undefined
> reference to `__xmlGenericError'
>
> /usr/lib/gcc/i686-linux-gnu/4.7/../../../../lib/libdcmsr.so: undefined
> reference to `xmlBufferCat'
>
> /usr/lib/gcc/i686-linux-gnu/4.7/../../../../lib/libdcmsr.so: undefined
> reference to `xmlSchemaValidateDoc'
>
> /usr/lib/gcc/i686-linux-gnu/4.7/../../../../lib/libdcmsr.so: undefined
> reference to `xmlSchemaFreeParserCtxt'
>
> /usr/lib/gcc/i686-linux-gnu/4.7/../../../../lib/libdcmsr.so: undefined
> reference to `xmlCharEncOutFunc'
>
> /usr/lib/gcc/i686-linux-gnu/4.7/../../../../lib/libdcmsr.so: undefined
> reference to `xmlHasProp'
>
> /usr/lib/gcc/i686-linux-gnu/4.7/../../../../lib/libdcmsr.so: undefined
> reference to `xmlStrcmp'
>
> /usr/lib/gcc/i686-linux-gnu/4.7/../../../../lib/libdcmsr.so: undefined
> reference to `xmlStrlen'
>
> /usr/lib/gcc/i686-linux-gnu/4.7/../../../../lib/libdcmsr.so: undefined
> reference to `xmlSubstituteEntitiesDefault'
>
> /usr/lib/gcc/i686-linux-gnu/4.7/../../../../lib/libdcmsr.so: undefined
> reference to `xmlBufferCreate'
>
> /usr/lib/gcc/i686-linux-gnu/4.7/../../../../lib/libdcmsr.so: undefined
> reference to `xmlSchemaNewParserCtxt'
>
> /usr/lib/gcc/i686-linux-gnu/4.7/../../../../lib/libdcmsr.so: undefined
> reference to `xmlGetProp'
>
> collect2: error: ld returned 1 exit status
>
> make[3]: *** [ginkgocadx/ginkgocadx] Error 1
>
> make[3]: Leaving directory
> `/home/basti/Sources/ubuntu-packages/ginkgo-cadx/ginkgocadx-3.2.0.634.25/obj-i686-linux-gnu'
>
> make[2]: *** [ginkgocadx/CMakeFiles/ginkgocadx.dir/all] Error 2
>
> make[2]: Leaving directory
> `/home/basti/Sources/ubuntu-packages/ginkgo-cadx/ginkgocadx-3.2.0.634.25/obj-i686-linux-gnu'
>
> make[1]: *** [all] Error 2
>
> make[1]: Leaving directory
> `/home/basti/Sources/ubuntu-packages/ginkgo-cadx/ginkgocadx-3.2.0.634.25/obj-i686-linux-gnu'
>
> dh_auto_build: make -j1 returned exit code 2
>
> make: *** [build-arch] Error 2
>
> dpkg-buildpackage: error: debian/rules build-arch gave error exit status 2
>
> debuild: fatal error at line 1357:
>
> dpkg-buildpackage -rfakeroot -D -us -uc -B failed
>
>
>
> Sebastian



-- 
Mathieu
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