Bug#724280: ITP: rtax -- Rapid and accurate taxonomic classification of short paired-end sequence reads from the 16S ribosomal RNA gene
Hi Simon,
I have not seen the package in NEW any more and also I can not find a
package with this name inside the pool. So it seems it has not passed
ftpmasters check. Do you have some VCS with the packaging (or
preferably might like to use Debian Med VCS)?
Kind regards
Andreas.
On Sun, Sep 29, 2013 at 08:37:40PM +0200, Andreas Tille wrote:
> Hi Simon,
>
> On Sun, Sep 29, 2013 at 09:18:58AM +0200, Simon Kainz wrote:
> > Thank you very much. My package is already in the NEW queue,
>
> Fine.
>
> > and after quickly inspecting the Debian Med Policy, i suspect i have to change some entries in the control file (at least) to make it compliant to the Debian Med Policy. So should I just reupload the package after applying my changes or should i wait for FTPMasters to either accept or reject the package. I just want to keep the work needed for the FTPMasters as small as possible, so maybe someone might give ma a hint as how to handle this.
>
> It's perfectly OK to wait for ftpmaster response and leave the package
> in new as is. I have added rtax to the Debian Med bio task as you can
> see on the according tasks page.[1]
>
> > Concerning packaging: For packaging itself, i think i don't need help- i already did some packaging work (for some local packages used ad work) and i have a very competent sponsor which helped me to create my packages.
>
> We do absolutely not want to disrupt your workflow / relation to your
> sponsor. It is just an offer since in some cases it has turned out to
> be hard to find a sponsor.
>
> > I will try to get my work into alioth/debian-med.
>
> That would be great and hopefully helpfull also for your work.
>
> > I will contact debian-med when I am getting stuck, so be prepared for some questions :-)
>
> That's what we are keen on. :-)
>
> Kind regards
>
> Andreas.
>
> [1] http://debian-med.alioth.debian.org/tasks/bio#rtax
>
> > > Am 28.09.2013 um 21:51 schrieb Andreas Tille <andreas@an3as.eu>:
> > >
> > > Hi Simon,
> > >
> > > this package is a perfect target for Debian Med but I noticed you are
> > > not yet a member of the Alioth team. Since I'm currently on vaccation
> > > and not frequently online I just added skainz-guest to the Debian Med
> > > team simply assuming you might consider using Debian Med VCS as
> > > described in our team policy[1]. I hope you agree with this and please
> > > let us know if you need any help with the packaging.
> > >
> > > Kind regards
> > >
> > > Andreas.
> > >
> > > [1] http://debian-med.alioth.debian.org/docs/policy.html
> > >
> > >> On Mon, Sep 23, 2013 at 11:56:03AM +0200, Simon Kainz wrote:
> > >> Package: wnpp
> > >> Severity: wishlist
> > >> Owner: Simon Kainz <simon@familiekainz.at>
> > >>
> > >> * Package name : rtax
> > >> Version : 0.983
> > >> Upstream Author : David A. W. Soergel <David A. W. Soergel>
> > >> * URL : David A. W. Soergel
> > >> * License : BSD
> > >> Programming Lang: Perl
> > >> Description : Rapid and accurate taxonomic classification of short
> > >> paired-end sequence reads from the 16S ribosomal RNA gene
> > >>
> > >> Short-read technologies for microbial community profiling are increasingly
> > >> popular, yet previous techniques for assigning taxonomy to paired-end reads
> > >> perform poorly. RTAX provides rapid taxonomic assignments of paired-end reads
> > >> using a consensus algorithm.
> > >>
> > >> This tool is an optional dependency for qiime(which is already packaged) and it
> > >> would be great to have it
> > >> packaged for Debian.
> > >>
> > >> Regards,
> > >>
> > >> Simon
> > >>
> > >>
> > >> --
> > >> To UNSUBSCRIBE, email to debian-devel-REQUEST@lists.debian.org
> > >> with a subject of "unsubscribe". Trouble? Contact listmaster@lists.debian.org
> > >> Archive: http://lists.debian.org/20130923095603.26061.18627.reportbug@zidpc9027.tu-graz.ac.at
> > >
> > > --
> > > http://fam-tille.de
> >
>
> --
> http://fam-tille.de
>
>
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>
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