Re: Bug#724280: ITP: rtax -- Rapid and accurate taxonomic classification of short paired-end sequence reads from the 16S ribosomal RNA gene
Hi Simon,
On Sun, Sep 29, 2013 at 09:18:58AM +0200, Simon Kainz wrote:
> Thank you very much. My package is already in the NEW queue,
Fine.
> and after quickly inspecting the Debian Med Policy, i suspect i have to change some entries in the control file (at least) to make it compliant to the Debian Med Policy. So should I just reupload the package after applying my changes or should i wait for FTPMasters to either accept or reject the package. I just want to keep the work needed for the FTPMasters as small as possible, so maybe someone might give ma a hint as how to handle this.
It's perfectly OK to wait for ftpmaster response and leave the package
in new as is. I have added rtax to the Debian Med bio task as you can
see on the according tasks page.[1]
> Concerning packaging: For packaging itself, i think i don't need help- i already did some packaging work (for some local packages used ad work) and i have a very competent sponsor which helped me to create my packages.
We do absolutely not want to disrupt your workflow / relation to your
sponsor. It is just an offer since in some cases it has turned out to
be hard to find a sponsor.
> I will try to get my work into alioth/debian-med.
That would be great and hopefully helpfull also for your work.
> I will contact debian-med when I am getting stuck, so be prepared for some questions :-)
That's what we are keen on. :-)
Kind regards
Andreas.
[1] http://debian-med.alioth.debian.org/tasks/bio#rtax
> > Am 28.09.2013 um 21:51 schrieb Andreas Tille <andreas@an3as.eu>:
> >
> > Hi Simon,
> >
> > this package is a perfect target for Debian Med but I noticed you are
> > not yet a member of the Alioth team. Since I'm currently on vaccation
> > and not frequently online I just added skainz-guest to the Debian Med
> > team simply assuming you might consider using Debian Med VCS as
> > described in our team policy[1]. I hope you agree with this and please
> > let us know if you need any help with the packaging.
> >
> > Kind regards
> >
> > Andreas.
> >
> > [1] http://debian-med.alioth.debian.org/docs/policy.html
> >
> >> On Mon, Sep 23, 2013 at 11:56:03AM +0200, Simon Kainz wrote:
> >> Package: wnpp
> >> Severity: wishlist
> >> Owner: Simon Kainz <simon@familiekainz.at>
> >>
> >> * Package name : rtax
> >> Version : 0.983
> >> Upstream Author : David A. W. Soergel <David A. W. Soergel>
> >> * URL : David A. W. Soergel
> >> * License : BSD
> >> Programming Lang: Perl
> >> Description : Rapid and accurate taxonomic classification of short
> >> paired-end sequence reads from the 16S ribosomal RNA gene
> >>
> >> Short-read technologies for microbial community profiling are increasingly
> >> popular, yet previous techniques for assigning taxonomy to paired-end reads
> >> perform poorly. RTAX provides rapid taxonomic assignments of paired-end reads
> >> using a consensus algorithm.
> >>
> >> This tool is an optional dependency for qiime(which is already packaged) and it
> >> would be great to have it
> >> packaged for Debian.
> >>
> >> Regards,
> >>
> >> Simon
> >>
> >>
> >> --
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> >> Archive: http://lists.debian.org/20130923095603.26061.18627.reportbug@zidpc9027.tu-graz.ac.at
> >
> > --
> > http://fam-tille.de
>
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