r-bioc-txdb.hsapiens.ucsc.hg19.knowngene on salsa Re: please kindly review: r-bioc-fishpond -- Fishpond: differential transcript and gene expression with

[Steffen Möller <steffen_moeller@gmx.de>]

Hi all,

On 10.12.21 17:46, Andreas Tille wrote:
> Am Fri, Dec 10, 2021 at 11:57:49AM +0100 schrieb Steffen Möller:
> > https://bugs.debian.org/cgi-bin/bugreport.cgi?bug=1001436
> >
> > for r-bioc-txdb.hsapiens.ucsc.hg19.knowngene and when I wanted to inject
> > it found that it is already existing at
> >
> > https://salsa.debian.org/r-pkg-team/r-bioc-txdb.hsapiens.ucsc.hg19.knowngene
> >
> > in a "debian folder only" stage and 4 years old.
> >
> > You do not mind if I somehow adopt that?
> I don't mind at all.  I remember that I used debian/ dir only due to the
> size of the source which might have been an issue at the time of
> creation.  Technically I wonder whether it makes sense to remove the
> repository first and create it from scratch via
> prepare_missing_cran_package.  It could perfectly be the case that it is
> the more straight approach to get a sensible package - but I'll leave
> this decision to you.

I did not have the privileges to remove the previous
r-bioc-txdb.hsapiens.ucsc.hg19.knowngene repository but could rename it,
so that is what I have done and then injected the new one.

Best,
Steffen