Re: Participation to Debian Med
Hi Andreas,
Thank you for the answer - I am dealing with a fair share of sequencing data, and some of the programs I use are not packaged (as far as I know). So I would suggest tools that I use indeed, of which either Bandage [0] or Unicycler [1] may be a good start. I had a chance to help debug a bit Unicycler with Ryan (the author) and it was a very nice exchange.
Does that sound good? I can think of other suggestions should those prove too difficult.
With kind regards,
Cedric
[0] https://github.com/rrwick/Bandage/
[1] https://github.com/rrwick/Unicycler
________________________________________
From: Andreas Tille <andreas@fam-tille.de>
Sent: Friday, July 14, 2017 9:06 AM
To: Cédric Lood
Cc: debian-med@lists.debian.org
Subject: Re: Participation to Debian Med
Hi Cédric,
thanks for your interest in Debian Med.
On Thu, Jul 13, 2017 at 01:21:24PM +0000, Cédric Lood wrote:
> I am contacting you after having been lurking for some time the Debian Med project and would like to help out. I have some experience with using Linux (my own background being in CS and bioinfo), and I have an interest to learn the tricks of the trade behind the maintenance of packages. So far, I have been reading the project's group policy and discovered you had a mentoring program - I would like to enter that program if anyone would be willing to pair up.
Sounds very good.
> You can reach me here, or via IRC (altersid on freenode/debian).
I admit I prefer communication via e-mail list but if needed I'm fine to
schedule IRC meetings outside office hours. The only time when I'm
available on IRC fully is at DebConf - which will be in August. ;-)
You can find the mentoring program here
https://wiki.debian.org/DebianMed/MoM
Feel free to pick some program that might be used by you but is not
yet packaged for Debian or pick from our todo list starting here
https://blends.debian.org/med/tasks/bio#pkgvcs-debs
what you might consider interesting for your work and we can start
with the mentoring.
> Looking forward to hear from you,
Kind regards
Andreas.
--
http://fam-tille.de
Reply to: