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Re: Help for next version of freebayes needed: libseqlib build error



Hi Ghislain,

On Fri, Jan 27, 2017 at 04:22:18PM +0000, Ghislain Vaillant wrote:
> > 
> > Upstream was very responsive[1] and seems to be willing to solve the
> > issue.  Is there any suggestion whom to contact first BWA or FML?
> 
> Probably the newest of the two. Afterall, whoever was last should have
> done their homework and check that the exported typedefs were not used
> anywhere else. That being said, the SeqLib devs should have kickstarted
>  this discussion instead of silently forking.
> 
> In practice, due to the lack of namespacing in C, it is strongly
> encouraged to prefix anything publicly exported with a project specific
> identifier (here bwa_ and fml_ for instance). This piece of advice
> should apply to both projects anyway, so I believe it is worth
> contacting both.

SeqLib upstream has just opened an issue for fermi-lite[1].  I'll see
how this might develop.

Kind regards

        Andreas.

[1] https://github.com/lh3/fermi-lite/issues/5 

-- 
http://fam-tille.de


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