Re: header package for samtools

[Charles Plessy <plessy@debian.org>]

Le Wed, Dec 23, 2015 at 08:01:07PM -0800, Afif Elghraoui a écrit :
> 
> lofreq requires at least samtools 1.1. I did try using the libbam-dev
> package for this, but it wasn't compatible.
> 
> In any case, I think there is a similar situation with pysam and the
> samtools R-bindings, but that they just distribute code copies.

Hi Afif,

how about asking to the lofreq authors if they can use the htslib directly
instead of libbam ?

If not, it should be easy to add a samtools-dev package as you proposed.

Cheers,

-- 
Charles