Re: Java help for beast needed

[Andreas Tille <andreas@an3as.eu>]

On Wed, Jun 06, 2012 at 08:33:49AM +0200, Olivier Sallou wrote:
> >> Any idea? (You can get the upstream source tarball via
> > After a look, it appears that beagle package  (beagle/beagle.java) does
> > not provide method
> >
> > convolveTransitionMatrices
> >
> >
> > So I think there is a version issue between beagle and beast-mcmc use of
> > beagle (too recent or not recent enough)
> > Olivier
> It is available is Beast 1.1, you should upgrade package first...  :-(

Hmmm, if I'm using
 
     uscan --verbose --force-depends

I get an orig.source.gz containing:

$ ls libhmsbeagle-1.1/java/beagle/
BeagleErrorCode.java  BeagleInfo.java        DependencyAwareBeagleImpl.java  ResourceDetails.java
BeagleException.java  Beagle.java            FourStateBeagleImpl.java
BeagleFactory.java    BeagleJNIImpl.java     GeneralBeagleImpl.java
BeagleFlag.java       BeagleJNIWrapper.java  InstanceDetails.java
$ grep -R convolveTransitionMatrices libhmsbeagle-1.1
$

So from my perspective there is no such method convolveTransitionMatrices.

How exactly did you got a tarball containing this method?  Straight
checkout form SVN?

Kind regards

      Andreas.

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