Re: [Soap] Source code for SOAPdenovo available?
I think Mr Lo did not see that the debian-med emailing list is
included in the cc: :)
I was praising Mr Lo, in hopes that I would flatter him enough to
release the SOAPdenovo code under the GPL :D
What he means by "using your's resource to compile the latest
version", is that he hopes that KAUST and genomics.org.cn collaborate
to keep on providing a PowerPC binary. So, in a sense, yeah, Mr Lo's
comment was kind of an internal discussion.
Mr Lo: Mr. Tille is asking if you would please consider releasing
the source code under the GNU Public License, for the greater benefit
of everybody. Mr. Tille wants to include your software into the Debian
GNU/Linux Medical project. A lot of other bioinformatics tools are
being made available to the whole world via Debian, under a Free (as
in Liberty) License.
Would you consider releasing your source code?
On Sat, Feb 12, 2011 at 10:06 AM, Andreas Tille <andreas@an3as.eu> wrote:
> Hi,
>
> I have no idea what you mean with "using your's resource to compile the
> latest version"? If this is a SOAP denovo internal discussion I'll keep
> on waiting but if I can do something to help please be more verbose. In
> Debian we have autobuilder which are compiling for several architectures
> (including powerpc) automatically - but to get this we need to have a
> free source code first.
>
> Kind regards
>
> Andreas.
>
> On Sat, Feb 12, 2011 at 10:55:01AM +0800, Aqua Lo wrote:
>> Dear George,
>>
>> Our pleasure.
>> I also plan to publish the powerpc version on to the soap website with the help of KAUST, if it's possible for you to forward me the compiled binary since I've no idea on how to transfer it back to me. And before our release of the code, it would be our honor to keep using your's resource to compile the latest version of SOAPdenovo if it's acceptable
>>
>>
>> Best!
>>
>> RuiBang Luo
>> BGI-Shenzhen
>>
>>
>>
>>
>> On 2011-2-12, at 上午4:14, George Marselis wrote:
>>
>> > hey guys, I have to hand it to the soap denovo people. Ruibang Luo
>> > <luoruibang@genomics.org.cn> actually spent some of his precious time
>> > to help me out at KAUST, where we have a pretty peculiar setup: Power7
>> > series with 512GB of RAm and ugh, RHEL 5.4. It would be godsend if
>> > they would publish the binary on their site or published the code on
>> > their site.
>> >
>> > still, A+ for their willingness to help us out. :)
>> >
>> > On Fri, Feb 11, 2011 at 5:03 PM, Andreas Tille <andreas@an3as.eu> wrote:
>> >> Hi,
>> >>
>> >> I'm writing on behalf of the Debian Med project which tries to assemble
>> >> Free Software for bio-medical research in a ready to install form inside
>> >> the Debian GNU/Linux system (and thus as a consequence into Ubuntu). A
>> >> colleague of mine started using SOAPdenovo and thus I'm considering it
>> >> a good target for including it into Debian. When reading the homepage[1]
>> >> I see
>> >>
>> >> "Only precompiled binary version available now."
>> >>
>> >> The question is: If the source is not available NOW, do you have any
>> >> plans for the future? Will you possibly release the source code under
>> >> a license which would enable us packaging it for Debian? Any free
>> >> license (like GPL, BSD or something like this) would be really great.
>> >> If you would consider to provide the source under a free license we hope
>> >> to be able ti make your program even more popular in the bio-medical
>> >> researchers world because Debian and its bio-medical derivatives seem to
>> >> become more and more interesting by assembling a useful set of tools
>> >> which covers all workfields in Biology.
>> >>
>> >> Kind regards
>> >>
>> >> Andreas.
>> >>
>> >> [1] http://soap.genomics.org.cn/soapdenovo.html
>> >>
>> >> --
>> >> http://fam-tille.de
>> >>
>> >>
>> >> --
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>> >> Archive: [🔎] 20110211140353.GC9160@an3as.eu">http://lists.debian.org/[🔎] 20110211140353.GC9160@an3as.eu
>> >>
>> >>
>> >
>>
>>
>
> --
> http://fam-tille.de
>
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