Bug#671224: ITP: saint -- Significance Analysis of INTeractome
Package: wnpp
Severity: wishlist
Owner: Andreas Tille <tille@debian.org>
* Package name : saint
Version : 2.3.3
Upstream Author : Hyung Won Choi <hyung_won_choi@nuhs.edu.sg>
* URL : http://saint-apms.sourceforge.net/Main.html
* License : GPL
Programming Lang: C
Description : Significance Analysis of INTeractome
SAINT implements the scoring algorithm for protein-protein interaction
data using label free quantitative proteomics data in AP-MS experiments.
It was used for spectral count data in the yeast kinase interactome work
not incorporating control purification, as well as a generalized
implementation for spectral count data with and without control
purification.
.
Alternatively, you can also run SAINT in combination with ProHits.
.
The package was written for either doing analysis without or with
control IPs and
The package will be maintained in the Debian Med team and the packaging
code is available at
svn://svn.debian.org/debian-med/trunk/packages/saint/trunk/
Reply to: