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Re: [RFS] zarr, numcodecs and asctree



I granted you maintainer-role. Please try again.

Anton

Am So., 5. Jan. 2020 um 11:28 Uhr schrieb Antonio Valentino
<antonio.valentino@tiscali.it>:
>
> Hi Anton,
>
> Il 05/01/20 10:51, Anton Gladky ha scritto:
> > Hi Antonio,
> >
> > https://salsa.debian.org/science-team/pyzoltan
> >
> > please push pyzoltan into salsa.
>
> Thanks for creating the repo.
> It seems I'm not allowed to create new branches anyway
>
> remote: GitLab:
> remote: A default branch (e.g. master) does not yet exist for
> science-team/pyzoltan
> remote: Ask a project Owner or Maintainer to create a default branch:
> remote:
> remote:   https://salsa.debian.org/science-team/pyzoltan/-/project_members
> remote:
> To salsa.debian.org:science-team/pyzoltan.git
>  ! [remote rejected] master -> master (pre-receive hook declined)
>  ! [remote rejected] pristine-tar -> pristine-tar (pre-receive hook
> declined)
>  ! [remote rejected] upstream -> upstream (pre-receive hook declined)
> error: failed to push some refs to
> 'git@salsa.debian.org:science-team/pyzoltan.git'
>
>
> Maybe sometnig has been changed inthe permissions policy because I don't
> remember I had the same problem last time.
>
> > Source-only upload of the zarr is done.
>
> thanks a lot
>
>
>
> regards
> antonio
>
> > Am So., 5. Jan. 2020 um 09:57 Uhr schrieb Antonio Valentino
> > <antonio.valentino@tiscali.it>:
> >>
> >> Dear Anton,
> >> zarr is now into unstable.
> >> Thank you again for your help.
> >>
> >> Please remember to make a source upload at some point to allow the
> >> migration to testing.
> >>
> >> I'm working on a new package for pyzoltan [1], a wrapper for the Zoltan
> >> data management library.
> >> It is an optional dependency of pysph [2] that allows to enable parallel
> >> features based on MPI.
> >> I would like to maintain pyzoltan in debian science.
> >>
> >> Are you interested to sponsor it?
> >>
> >> I have already uploaded the package on mentors.d.n [3], of course I can
> >> push the package on salsa if you create the repository form me.
> >>
> >> [1] https://bugs.debian.org/cgi-bin/bugreport.cgi?bug=948118
> >> [2] https://tracker.debian.org/pkg/pysph
> >> [3] https://mentors.debian.net/package/pyzoltan
> >>
> >>
> >> kind regards
> >> antonio
> >>
> >> Il 01/01/20 21:30, Anton Gladky ha scritto:
> >>> Uploaded! Thanks for contribution and happy new year!
> >>>
> >>> Anton
> >>>
> >>> Am Do., 26. Dez. 2019 um 11:20 Uhr schrieb Antonio Valentino
> >>> <antonio.valentino@tiscali.it>:
> >>>>
> >>>> Dear Anton,
> >>>> finally numcodecs has been accepted in unstable so now it is possible to
> >>>> upload zarr [1,2].
> >>>> I would really appreciate if you could go ahead with the upload.
> >>>>
> >>>> Please also consider to make a new source-only upload for
> >>>>
> >>>> * ascitree
> >>>> * compyle
> >>>> * cyarrays
> >>>> * numcodecs
> >>>>
> >>>> to allow migration to testing.
> >>>> Also I have just updated numcodecs to the latest upstream release.
> >>>>
> >>>> [1] https://bugs.debian.org/cgi-bin/bugreport.cgi?bug=888481
> >>>> [2] https://salsa.debian.org/science-team/zarr
> >>>>
> >>>>
> >>>> kind regards
> >>>> antonio
> >>>>
> >>>> Il 18/11/19 09:07, Antonio Valentino ha scritto:
> >>>>> Dear Anton,
> >>>>> yesterday I made some few updates to numcodecs and zarr, now they should
> >>>>> be in a good shape and ready for the upload.
> >>>>> Please let me know if there is some thing else I have to fix.
> >>>>>
> >>>>>
> >>>>> kind regards
> >>>>> antonio
> >>>>>
> >>>>> Il 13/11/19 07:36, Antonio Valentino ha scritto:
> >>>>>> Dear Anton,
> >>>>>> I think I have addressed all issues some times ago but I forgot to send
> >>>>>> you feedback. Sorry.
> >>>>>>
> >>>>>> The fixture folder (containing binary data) has been removed form
> >>>>>> sources, both from numcodecs and zarr.
> >>>>>> Also now zarr seems to build correctly: fixed missing build dependencies.
> >>>>>>
> >>>>>>
> >>>>>> kind regards
> >>>>>> antonio
> >>>>>>
> >>>>>> Il 25/10/19 23:44, Antonio Valentino ha scritto:
> >>>>>>> Dear Anton,
> >>>>>>> thank you for your support
> >>>>>>>
> >>>>>>> Il 24/10/19 21:03, Anton Gladky ha scritto:
> >>>>>>>> Hello Antonio,
> >>>>>>>>
> >>>>>>>> * asciitree is uploaded.
> >>>>>>>
> >>>>>>> ok, thanks
> >>>>>>>> * zarr and numcodecs are  containing binaries in the ./fixture folders.
> >>>>>>>>   I am not sure, whether we can let it go into the Debian. What is it?
> >>>>>>>>   If it is images, I think, it is OK.
> >>>>>>>
> >>>>>>> AFAIK it is something that could be used to test the backward
> >>>>>>> compatibility but is seems that it is not actually used in the standard
> >>>>>>> test suite (no error in unittests if I just remove it).
> >>>>>>>
> >>>>>>> In any case it is not clear to me why it is installed in debian.
> >>>>>>>
> >>>>>>> Anyway my plan is to remove it form sources.
> >>>>>>>
> >>>>>>>> * zarr needs a dependency on python3-numpydoc. And it still fails to build.
> >>>>>>>>    Please check.
> >>>>>>>
> >>>>>>> ok, thanks, I will fix it
> >>>>>>>
> >>>>>>>
> >>>>>>>
> >>>>>>> kind regards
> >>>>>>> antonio
> >>>>>>>
> >>>>>>>> Am Sa., 12. Okt. 2019 um 13:16 Uhr schrieb Antonio Valentino
> >>>>>>>> <antonio.valentino@tiscali.it>:
> >>>>>>>>>
> >>>>>>>>> Dear Anton,
> >>>>>>>>>
> >>>>>>>>> Il 12/10/19 13:00, Anton Gladky ha scritto:
> >>>>>>>>>> Hello Antonio,
> >>>>>>>>>>
> >>>>>>>>>> I have created three repos:
> >>>>>>>>>>
> >>>>>>>>>> https://salsa.debian.org/science-team/asciitree
> >>>>>>>>>> https://salsa.debian.org/science-team/numcodecs
> >>>>>>>>>> https://salsa.debian.org/science-team/zarr
> >>>>>>>>>
> >>>>>>>>> thank you.
> >>>>>>>>>
> >>>>>>>>>> Please push your work there and I will review and upload those packages.
> >>>>>>>>>
> >>>>>>>>> done
> >>>>>>>>>
> >>>>>>>>> kind regards
> >>>>>>>>> Antonio
> >>>>>>>>>
> >>>>>>>>>
> >>>>>>>>>> Am Sa., 12. Okt. 2019 um 10:13 Uhr schrieb Antonio Valentino
> >>>>>>>>>> <antonio.valentino@tiscali.it>:
> >>>>>>>>>>>
> >>>>>>>>>>> Dear Debian Science maintainers,
> >>>>>>>>>>> I took in charge the RFP for zarr [1] opened by  Ghislain (in CC).
> >>>>>>>>>>>
> >>>>>>>>>>> Zarr is a Python package providing an implementation of chunked,
> >>>>>>>>>>> compressed, N-dimensional arrays.
> >>>>>>>>>>>
> >>>>>>>>>>> Zarr depends on numcodecs and asciitree which also have ITP issues [2,3].
> >>>>>>>>>>>
> >>>>>>>>>>> Please note that the ITP issue for asciitree [3] is currently assigned
> >>>>>>>>>>> to Dominik in CC to this email. Please Dominik let me know you have
> >>>>>>>>>>> different plans for asciitree.
> >>>>>>>>>>>
> >>>>>>>>>>> Zarr is also a new backend for python-xarray which is maintained in
> >>>>>>>>>>> Debian Science and also it is a new dependency for satpy [5] which is
> >>>>>>>>>>> maintained in Debian Gis.
> >>>>>>>>>>>
> >>>>>>>>>>> I would like to maintain this packages under Debian Science so I'm
> >>>>>>>>>>> looking for a sponsor and also a DD that can create repositories on salsa.
> >>>>>>>>>>>
> >>>>>>>>>>> All the 3 packages have been also uploaded to mentors.d.net [6,7,8] in
> >>>>>>>>>>> case someone wants to give them a try.
> >>>>>>>>>>>
> >>>>>>>>>>>
> >>>>>>>>>>> [1] https://bugs.debian.org/cgi-bin/bugreport.cgi?bug=888481
> >>>>>>>>>>> [2] https://bugs.debian.org/cgi-bin/bugreport.cgi?bug=888482
> >>>>>>>>>>> [3] https://bugs.debian.org/cgi-bin/bugreport.cgi?bug=904443
> >>>>>>>>>>> [4] https://tracker.debian.org/pkg/python-xarray
> >>>>>>>>>>> [5] https://tracker.debian.org/pkg/satpy
> >>>>>>>>>>> [6] https://mentors.debian.net/package/zarr
> >>>>>>>>>>> [7] https://mentors.debian.net/package/numcodecs
> >>>>>>>>>>> [8] https://mentors.debian.net/package/asciitree
> >>>>>>>>>>>
> >>>>>>>>>>>
> >>>>>>>>>>> kind regards
> >>>>>>>>>>>
> >>>>>>>>>>> --
> >>>>>>>>>>> Antonio Valentino
> >>>>>>>>>>>
> >>>>>>>>>>
> >>>>>>>>>
> >>>>>>>>> --
> >>>>>>>>> Antonio Valentino
> >>>>>>>>
> >>>>>>>
> >>>>>>
> >>>>>
> >>>>
> >>>> --
> >>>> Antonio Valentino
> >>>
> >>
> >> --
> >> Antonio Valentino
> >>
> >
>
> --
> Antonio Valentino
>


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