Re: [RFS] zarr, numcodecs and asctree
Hi Anton,
Il 05/01/20 10:51, Anton Gladky ha scritto:
> Hi Antonio,
>
> https://salsa.debian.org/science-team/pyzoltan
>
> please push pyzoltan into salsa.
Thanks for creating the repo.
It seems I'm not allowed to create new branches anyway
remote: GitLab:
remote: A default branch (e.g. master) does not yet exist for
science-team/pyzoltan
remote: Ask a project Owner or Maintainer to create a default branch:
remote:
remote: https://salsa.debian.org/science-team/pyzoltan/-/project_members
remote:
To salsa.debian.org:science-team/pyzoltan.git
! [remote rejected] master -> master (pre-receive hook declined)
! [remote rejected] pristine-tar -> pristine-tar (pre-receive hook
declined)
! [remote rejected] upstream -> upstream (pre-receive hook declined)
error: failed to push some refs to
'git@salsa.debian.org:science-team/pyzoltan.git'
Maybe sometnig has been changed inthe permissions policy because I don't
remember I had the same problem last time.
> Source-only upload of the zarr is done.
thanks a lot
regards
antonio
> Am So., 5. Jan. 2020 um 09:57 Uhr schrieb Antonio Valentino
> <antonio.valentino@tiscali.it>:
>>
>> Dear Anton,
>> zarr is now into unstable.
>> Thank you again for your help.
>>
>> Please remember to make a source upload at some point to allow the
>> migration to testing.
>>
>> I'm working on a new package for pyzoltan [1], a wrapper for the Zoltan
>> data management library.
>> It is an optional dependency of pysph [2] that allows to enable parallel
>> features based on MPI.
>> I would like to maintain pyzoltan in debian science.
>>
>> Are you interested to sponsor it?
>>
>> I have already uploaded the package on mentors.d.n [3], of course I can
>> push the package on salsa if you create the repository form me.
>>
>> [1] https://bugs.debian.org/cgi-bin/bugreport.cgi?bug=948118
>> [2] https://tracker.debian.org/pkg/pysph
>> [3] https://mentors.debian.net/package/pyzoltan
>>
>>
>> kind regards
>> antonio
>>
>> Il 01/01/20 21:30, Anton Gladky ha scritto:
>>> Uploaded! Thanks for contribution and happy new year!
>>>
>>> Anton
>>>
>>> Am Do., 26. Dez. 2019 um 11:20 Uhr schrieb Antonio Valentino
>>> <antonio.valentino@tiscali.it>:
>>>>
>>>> Dear Anton,
>>>> finally numcodecs has been accepted in unstable so now it is possible to
>>>> upload zarr [1,2].
>>>> I would really appreciate if you could go ahead with the upload.
>>>>
>>>> Please also consider to make a new source-only upload for
>>>>
>>>> * ascitree
>>>> * compyle
>>>> * cyarrays
>>>> * numcodecs
>>>>
>>>> to allow migration to testing.
>>>> Also I have just updated numcodecs to the latest upstream release.
>>>>
>>>> [1] https://bugs.debian.org/cgi-bin/bugreport.cgi?bug=888481
>>>> [2] https://salsa.debian.org/science-team/zarr
>>>>
>>>>
>>>> kind regards
>>>> antonio
>>>>
>>>> Il 18/11/19 09:07, Antonio Valentino ha scritto:
>>>>> Dear Anton,
>>>>> yesterday I made some few updates to numcodecs and zarr, now they should
>>>>> be in a good shape and ready for the upload.
>>>>> Please let me know if there is some thing else I have to fix.
>>>>>
>>>>>
>>>>> kind regards
>>>>> antonio
>>>>>
>>>>> Il 13/11/19 07:36, Antonio Valentino ha scritto:
>>>>>> Dear Anton,
>>>>>> I think I have addressed all issues some times ago but I forgot to send
>>>>>> you feedback. Sorry.
>>>>>>
>>>>>> The fixture folder (containing binary data) has been removed form
>>>>>> sources, both from numcodecs and zarr.
>>>>>> Also now zarr seems to build correctly: fixed missing build dependencies.
>>>>>>
>>>>>>
>>>>>> kind regards
>>>>>> antonio
>>>>>>
>>>>>> Il 25/10/19 23:44, Antonio Valentino ha scritto:
>>>>>>> Dear Anton,
>>>>>>> thank you for your support
>>>>>>>
>>>>>>> Il 24/10/19 21:03, Anton Gladky ha scritto:
>>>>>>>> Hello Antonio,
>>>>>>>>
>>>>>>>> * asciitree is uploaded.
>>>>>>>
>>>>>>> ok, thanks
>>>>>>>> * zarr and numcodecs are containing binaries in the ./fixture folders.
>>>>>>>> I am not sure, whether we can let it go into the Debian. What is it?
>>>>>>>> If it is images, I think, it is OK.
>>>>>>>
>>>>>>> AFAIK it is something that could be used to test the backward
>>>>>>> compatibility but is seems that it is not actually used in the standard
>>>>>>> test suite (no error in unittests if I just remove it).
>>>>>>>
>>>>>>> In any case it is not clear to me why it is installed in debian.
>>>>>>>
>>>>>>> Anyway my plan is to remove it form sources.
>>>>>>>
>>>>>>>> * zarr needs a dependency on python3-numpydoc. And it still fails to build.
>>>>>>>> Please check.
>>>>>>>
>>>>>>> ok, thanks, I will fix it
>>>>>>>
>>>>>>>
>>>>>>>
>>>>>>> kind regards
>>>>>>> antonio
>>>>>>>
>>>>>>>> Am Sa., 12. Okt. 2019 um 13:16 Uhr schrieb Antonio Valentino
>>>>>>>> <antonio.valentino@tiscali.it>:
>>>>>>>>>
>>>>>>>>> Dear Anton,
>>>>>>>>>
>>>>>>>>> Il 12/10/19 13:00, Anton Gladky ha scritto:
>>>>>>>>>> Hello Antonio,
>>>>>>>>>>
>>>>>>>>>> I have created three repos:
>>>>>>>>>>
>>>>>>>>>> https://salsa.debian.org/science-team/asciitree
>>>>>>>>>> https://salsa.debian.org/science-team/numcodecs
>>>>>>>>>> https://salsa.debian.org/science-team/zarr
>>>>>>>>>
>>>>>>>>> thank you.
>>>>>>>>>
>>>>>>>>>> Please push your work there and I will review and upload those packages.
>>>>>>>>>
>>>>>>>>> done
>>>>>>>>>
>>>>>>>>> kind regards
>>>>>>>>> Antonio
>>>>>>>>>
>>>>>>>>>
>>>>>>>>>> Am Sa., 12. Okt. 2019 um 10:13 Uhr schrieb Antonio Valentino
>>>>>>>>>> <antonio.valentino@tiscali.it>:
>>>>>>>>>>>
>>>>>>>>>>> Dear Debian Science maintainers,
>>>>>>>>>>> I took in charge the RFP for zarr [1] opened by Ghislain (in CC).
>>>>>>>>>>>
>>>>>>>>>>> Zarr is a Python package providing an implementation of chunked,
>>>>>>>>>>> compressed, N-dimensional arrays.
>>>>>>>>>>>
>>>>>>>>>>> Zarr depends on numcodecs and asciitree which also have ITP issues [2,3].
>>>>>>>>>>>
>>>>>>>>>>> Please note that the ITP issue for asciitree [3] is currently assigned
>>>>>>>>>>> to Dominik in CC to this email. Please Dominik let me know you have
>>>>>>>>>>> different plans for asciitree.
>>>>>>>>>>>
>>>>>>>>>>> Zarr is also a new backend for python-xarray which is maintained in
>>>>>>>>>>> Debian Science and also it is a new dependency for satpy [5] which is
>>>>>>>>>>> maintained in Debian Gis.
>>>>>>>>>>>
>>>>>>>>>>> I would like to maintain this packages under Debian Science so I'm
>>>>>>>>>>> looking for a sponsor and also a DD that can create repositories on salsa.
>>>>>>>>>>>
>>>>>>>>>>> All the 3 packages have been also uploaded to mentors.d.net [6,7,8] in
>>>>>>>>>>> case someone wants to give them a try.
>>>>>>>>>>>
>>>>>>>>>>>
>>>>>>>>>>> [1] https://bugs.debian.org/cgi-bin/bugreport.cgi?bug=888481
>>>>>>>>>>> [2] https://bugs.debian.org/cgi-bin/bugreport.cgi?bug=888482
>>>>>>>>>>> [3] https://bugs.debian.org/cgi-bin/bugreport.cgi?bug=904443
>>>>>>>>>>> [4] https://tracker.debian.org/pkg/python-xarray
>>>>>>>>>>> [5] https://tracker.debian.org/pkg/satpy
>>>>>>>>>>> [6] https://mentors.debian.net/package/zarr
>>>>>>>>>>> [7] https://mentors.debian.net/package/numcodecs
>>>>>>>>>>> [8] https://mentors.debian.net/package/asciitree
>>>>>>>>>>>
>>>>>>>>>>>
>>>>>>>>>>> kind regards
>>>>>>>>>>>
>>>>>>>>>>> --
>>>>>>>>>>> Antonio Valentino
>>>>>>>>>>>
>>>>>>>>>>
>>>>>>>>>
>>>>>>>>> --
>>>>>>>>> Antonio Valentino
>>>>>>>>
>>>>>>>
>>>>>>
>>>>>
>>>>
>>>> --
>>>> Antonio Valentino
>>>
>>
>> --
>> Antonio Valentino
>>
>
--
Antonio Valentino
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