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Bug#926813: marked as done (unblock: python-scipy/1.1.0-5)

Your message dated Fri, 12 Apr 2019 04:47:32 +0200
with message-id <6f296b72-c07c-63c1-309e-b91bdf0cd470@debian.org>
and subject line Re: Bug#926813: unblock: python-scipy/1.1.0-6
has caused the Debian Bug report #926813,
regarding unblock: python-scipy/1.1.0-5
to be marked as done.

This means that you claim that the problem has been dealt with.
If this is not the case it is now your responsibility to reopen the
Bug report if necessary, and/or fix the problem forthwith.

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-- 
926813: https://bugs.debian.org/cgi-bin/bugreport.cgi?bug=926813
Debian Bug Tracking System
Contact owner@bugs.debian.org with problems
--- Begin Message --- 
Package: release.debian.org
Severity: normal
User: release.debian.org@packages.debian.org
Usertags: unblock

Please unblock package python-scipy

debci tests were intermittently failing (Bug#919929), evidently due to
running out of memory in the test system because of an excessive
number of deprecation warnings emitted during the tests.

1.1.0-4 applied a patch which eliminated the largest contribution to
the warnings (warnings about the matrix API from numpy 1.16).

But the remaining warnings were sufficient to continue to trigger
MemoryError failure in 2 tests, only in python2.  Tests in python3 all
pass with scipy 1.1.0-4.

scipy 1.1.0-5 simply skips those 2 python2 tests. With that, 1.1.0-5
now passes debci tests in testing and in unstable.

debdiff is:

$ debdiff python-scipy_1.1.0-4.dsc python-scipy_1.1.0-5.dsc
diff -Nru python-scipy-1.1.0/debian/changelog python-scipy-1.1.0/debian/changelog
--- python-scipy-1.1.0/debian/changelog	2019-03-14 14:12:00.000000000 +0800
+++ python-scipy-1.1.0/debian/changelog	2019-04-10 16:41:47.000000000 +0800
@@ -1,3 +1,11 @@
+python-scipy (1.1.0-5) unstable; urgency=medium
+
+  * Team upload.
+  * Skip sparsetools.TestInt32Overflow matvec tests on python2
+    (MemoryError). Closes: #919929.
+
+ -- Drew Parsons <dparsons@debian.org>  Wed, 10 Apr 2019 16:41:47 +0800
+
 python-scipy (1.1.0-4) unstable; urgency=medium
 
   * Team upload.
diff -Nru python-scipy-1.1.0/debian/tests/python2 python-scipy-1.1.0/debian/tests/python2
--- python-scipy-1.1.0/debian/tests/python2	2019-03-14 14:12:00.000000000 +0800
+++ python-scipy-1.1.0/debian/tests/python2	2019-04-10 16:41:47.000000000 +0800
@@ -27,6 +27,9 @@
 "sparse.tests.test_sparsetools.TestInt32Overflow.test_bsr_n_block[matmat]",
 "sparse.tests.test_sparsetools.TestInt32Overflow.test_bsr_n_block[matvecs]",
 "sparse.tests.test_sparsetools.TestInt32Overflow.test_bsr_n_block[transpose]",
+# postscriptum on Bug#919929
+"sparse.tests.test_sparsetools.TestInt32Overflow.test_matvecs",
+"sparse.tests.test_sparsetools.TestInt32Overflow.test_dia_matvec",
 ]
 
 junit = "$TMPDIR/junit.xml"


unblock python-scipy/1.1.0-5

-- System Information:
Debian Release: buster/sid
  APT prefers unstable
  APT policy: (500, 'unstable'), (1, 'experimental')
Architecture: amd64 (x86_64)
Foreign Architectures: i386

Kernel: Linux 4.19.0-4-amd64 (SMP w/4 CPU cores)
Kernel taint flags: TAINT_WARN, TAINT_OOT_MODULE, TAINT_UNSIGNED_MODULE
Locale: LANG=en_AU.UTF-8, LC_CTYPE=en_AU.UTF-8 (charmap=UTF-8), LANGUAGE=en_AU.UTF-8 (charmap=UTF-8)
Shell: /bin/sh linked to /bin/dash
Init: systemd (via /run/systemd/system)
LSM: AppArmor: enabled

--- End Message ---
--- Begin Message --- 
Hi Drew,

On 12-04-2019 05:45, Drew Parsons wrote:
> On 2019-04-12 11:43, Drew Parsons wrote:
>>
>> python-scipy/1.1.0-7 is now uploaded.

unblocked, thanks. And now let's hope that running the test 3x20 times
was enough to catch all flaky tests.

Paul

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