Bug#926813: unblock: python-scipy/1.1.0-6
On 2019-04-12 11:43, Drew Parsons wrote:
python-scipy/1.1.0-7 is now uploaded.
Here's the debdiff
$ debdiff python-scipy_1.1.0-4.dsc python-scipy_1.1.0-7.dsc
diff -Nru python-scipy-1.1.0/debian/changelog
python-scipy-1.1.0/debian/changelog
--- python-scipy-1.1.0/debian/changelog 2019-03-14 14:12:00.000000000
+0800
+++ python-scipy-1.1.0/debian/changelog 2019-04-12 00:46:35.000000000
+0800
@@ -1,3 +1,27 @@
+python-scipy (1.1.0-7) unstable; urgency=medium
+
+ * Team upload.
+ * Patch fix_test_optim_canonical~onstraint_2d7e7e8c.patch applies
+ upstream patch 2d7e7e8 to fix occasional random failures in
+ test_canonical_constraint.test_concatenation.
+
+ -- Drew Parsons <dparsons@debian.org> Fri, 12 Apr 2019 00:46:35 +0800
+
+python-scipy (1.1.0-6) unstable; urgency=medium
+
+ * Team upload.
+ * skip sparsetools.TestInt32Overflow matvec tests on python3 also.
+
+ -- Drew Parsons <dparsons@debian.org> Thu, 11 Apr 2019 09:38:17 +0800
+
+python-scipy (1.1.0-5) unstable; urgency=medium
+
+ * Team upload.
+ * Skip sparsetools.TestInt32Overflow matvec tests on python2
+ (MemoryError). Closes: #919929.
+
+ -- Drew Parsons <dparsons@debian.org> Wed, 10 Apr 2019 16:41:47 +0800
+
python-scipy (1.1.0-4) unstable; urgency=medium
* Team upload.
diff -Nru
python-scipy-1.1.0/debian/patches/fix_test_optim_canonical_constraint_2d7e7e8c.patch
python-scipy-1.1.0/debian/patches/fix_test_optim_canonical_constraint_2d7e7e8c.patch
---
python-scipy-1.1.0/debian/patches/fix_test_optim_canonical_constraint_2d7e7e8c.patch 1970-01-01
08:00:00.000000000 +0800
+++
python-scipy-1.1.0/debian/patches/fix_test_optim_canonical_constraint_2d7e7e8c.patch 2019-04-12
00:46:35.000000000 +0800
@@ -0,0 +1,37 @@
+From 2d7e7e8c6142e8925c44f92f6839147690880e7d Mon Sep 17 00:00:00 2001
+From: Warren Weckesser <warren.weckesser@gmail.com>
+Date: Wed, 10 Apr 2019 14:20:40 -0400
+Subject: [PATCH] BUG/TST: optimize: Fix a test that occasionally raises
an
+ exception.
+
+The test `test_initial_constraints_as_canonical()` in
+scipy/scipy/optimize/_trustregion_constr/tests/test_canonical_constraint.py
+occasionally raises an exception when it is run, because the random
initial
+value `x0` that it generates does not satisfy the nonlinear constraint
used
+in the test. To avoid this, use a fixed `x0` instead of generating it
+randomly.
+
+Closes gh-9308.
+---
+ .../_trustregion_constr/tests/test_canonical_constraint.py | 7 +++++--
+ 1 file changed, 5 insertions(+), 2 deletions(-)
+
+diff --git
a/scipy/optimize/_trustregion_constr/tests/test_canonical_constraint.py
b/scipy/optimize/_trustregion_constr/tests/test_canonical_constraint.py
+index 3ac51b6faa8..589f32f1aee 100644
+---
a/scipy/optimize/_trustregion_constr/tests/test_canonical_constraint.py
++++
b/scipy/optimize/_trustregion_constr/tests/test_canonical_constraint.py
+@@ -234,9 +234,12 @@ def test_empty():
+
+
+ def test_initial_constraints_as_canonical():
++ # rng is only used to generate the coefficients of the quadratic
++ # function that is used by the nonlinear constraint.
+ rng = np.random.RandomState(0)
+- n = 4
+- x0 = np.random.rand(n)
++
++ x0 = np.array([0.5, 0.4, 0.3, 0.2])
++ n = len(x0)
+
+ lb1 = [-1, -np.inf, -2, 3]
+ ub1 = [1, np.inf, np.inf, 3]
diff -Nru python-scipy-1.1.0/debian/patches/series
python-scipy-1.1.0/debian/patches/series
--- python-scipy-1.1.0/debian/patches/series 2019-03-14
14:12:00.000000000 +0800
+++ python-scipy-1.1.0/debian/patches/series 2019-04-12
00:46:35.000000000 +0800
@@ -4,3 +4,4 @@
matrix_API_614847c5.patch
matrix_API_more_e0cfa29e2.patch
matrix_API_filter_check_87e48c3c5.patch
+fix_test_optim_canonical_constraint_2d7e7e8c.patch
diff -Nru python-scipy-1.1.0/debian/tests/python2
python-scipy-1.1.0/debian/tests/python2
--- python-scipy-1.1.0/debian/tests/python2 2019-03-14
14:12:00.000000000 +0800
+++ python-scipy-1.1.0/debian/tests/python2 2019-04-12
00:46:35.000000000 +0800
@@ -27,6 +27,9 @@
"sparse.tests.test_sparsetools.TestInt32Overflow.test_bsr_n_block[matmat]",
"sparse.tests.test_sparsetools.TestInt32Overflow.test_bsr_n_block[matvecs]",
"sparse.tests.test_sparsetools.TestInt32Overflow.test_bsr_n_block[transpose]",
+# postscriptum on Bug#919929
+"sparse.tests.test_sparsetools.TestInt32Overflow.test_matvecs",
+"sparse.tests.test_sparsetools.TestInt32Overflow.test_dia_matvec",
]
junit = "$TMPDIR/junit.xml"
diff -Nru python-scipy-1.1.0/debian/tests/python3
python-scipy-1.1.0/debian/tests/python3
--- python-scipy-1.1.0/debian/tests/python3 2019-03-14
14:12:00.000000000 +0800
+++ python-scipy-1.1.0/debian/tests/python3 2019-04-12
00:46:35.000000000 +0800
@@ -19,6 +19,9 @@
"linalg.tests.test_solvers.test_solve_generalized_discrete_are",
# fails with atlas
"linalg.tests.test_solvers.test_solve_discrete_are",
+# postscriptum on Bug#919929
+"sparse.tests.test_sparsetools.TestInt32Overflow.test_matvecs",
+"sparse.tests.test_sparsetools.TestInt32Overflow.test_dia_matvec",
]
junit = "$TMPDIR/junit.xml"
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