Rafael Laboissiere <rafael@laboissiere.net> writes: > * Sébastien Villemot <sebastien.villemot@ens.fr> [2012-08-09 12:19]: > >> Sébastien Villemot <sebastien.villemot@ens.fr> writes: >> >> > Using the MPI version of HDF5 with liboctave-dev was not working (see >> > #598227). Then the HDF5 maintainers encouraged us to enforce the serial >> > version. >> >> I have just tested the solution that Thomas had implemented for Squeeze, >> which was: >> >> - make liboctave-dev depend on libhdf5-dev | libhdf5-openmpi-dev | >> libhdf5-mpich2-dev >> >> - add -I/usr/include/mpi to XTRA_CXXFLAGS in mkoctfile >> >> This change should not introduce new bugs. >> >> Then I have been able to compile octave-optim (which compiles .oct >> files) with libhdf5-openmpi-dev installed, and also with >> libhdf5-mpich2-dev. >> >> So it looks that this simple change solves the co-instability issue of >> HDF5/MPI with liboctave-dev. > > I am failing to replicate the above with the patch that you sent today. > When I install the patched version of the packages, liboctave1 still > depends on libhdf5-7, which conflicts with libhdf5-openmpi-7, and that > prevents the installation of libhdf5-openmpi-dev. I am surely missing > something here. libhdf5-openmpi-7 provides libhdf5-7, so you just uninstall the latter and install the former. Then you will be able to co-install libhdf5-openmpi-dev and the patched liboctave-dev. -- .''`. Sébastien Villemot : :' : Debian Maintainer `. `' http://www.dynare.org/sebastien `- GPG Key: 4096R/381A7594
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