Help with java package (beast-mcmc) needed
Hi,
I tried building a package from beast and uploaded for simlicity this
stuff to
http://people.debian.org/~tille/packages/beast-mcmc-help-wanted/
It contains six executable files in /usr/bin. Three of them are
starting nicely. These are beast-mcmc, beauti and loganalyser.
However, the other three executables are failing for a reason I do
not understand:
$ logcombiner
Exception in thread "main" java.lang.NoClassDefFoundError: jam/console/ConsoleApplication
at dr.app.tools.LogCombiner.main(Unknown Source)
Caused by: java.lang.ClassNotFoundException: jam.console.ConsoleApplication
at java.net.URLClassLoader$1.run(URLClassLoader.java:217)
at java.security.AccessController.doPrivileged(Native Method)
at java.net.URLClassLoader.findClass(URLClassLoader.java:205)
at java.lang.ClassLoader.loadClass(ClassLoader.java:321)
at sun.misc.Launcher$AppClassLoader.loadClass(Launcher.java:294)
at java.lang.ClassLoader.loadClass(ClassLoader.java:266)
... 1 more
The executable treeannotator fails with the very same error message
and for treestat I get:
$ treestat
Exception in thread "main" java.lang.NoClassDefFoundError: jam/framework/SingleDocApplication
at java.lang.ClassLoader.defineClass1(Native Method)
at java.lang.ClassLoader.defineClass(ClassLoader.java:634)
...
I checked that /usr/share/java/jam.jar is installed and contains the
relevant classes. Any idea what might went wrong here?
Kind regards
Andreas.
--
http://fam-tille.de
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