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Re: Help for new version of bowtie2 needed



Hi Andreas,

Andreas Tille, on 2022-11-04:
> Hi folks,
> 
> I'm afraid that we see some SIMDE issues here:
> 
>    https://salsa.debian.org/med-team/bowtie2/-/jobs/3474326
> 
> I'm not sure whether I refreshed the according patches properly so some
> review might make sense.

In the raw output, the error spewing begins with this paragraph:

	In file included from aligner_sw.h:73,
	                 from bt2_search.cpp:54:
	sse_wrap.h:122:2: error: #else after #else
	  122 | #else
	      |  ^~~~
	sse_wrap.h:30: error: the conditional began here
	   30 | #ifdef SSE_AVX2
	      | 
	sse_wrap.h:214:2: error: #endif without #if
	  214 | #endif /* SSE_WRAP_H_ */
	      |  ^~~~~

With some luck, it is just a matter of identifying which #else
is the proper one.  I may have a look this weekend if it turns
out to be more hairy than first thought.

Have a good evening,  :)
-- 
Étienne Mollier <emollier@emlwks999.eu>
Fingerprint:  8f91 b227 c7d6 f2b1 948c  8236 793c f67e 8f0d 11da
Sent from /dev/pts/2, please excuse my verbosity.
On air: Shumaun - Nafsi Ammara

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