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Re: Cmake help needed for ncbi-vdb


On Sun, Feb 20, 2022 at 8:25 AM Andreas Tille <andreas@an3as.eu> wrote:
> Hi,
> I think I need some cmake help for ncbi-vdb.  In former versions
> ncbi-vdb came with a hand-crafted build system.  Now cmake is provided
> alternatively which is a great progress IMHO since that hand-crafted
> system always created issues for every new version.  I started using
> cmake but its not finished yet[1].
> The point is that the linker flags to libmbedtls-dev, zlib and others
> need to be set.  Excluding references to code copies was easy[2] ... but
> now we need the according -l options and my cmake knowledge is to weak.

I've pushed a ugly hack... hopefully this can be discussed with
upstream for a better integration.

> Any help would be welcome
>       Andreas.
> [1] https://salsa.debian.org/med-team/ncbi-vdb/-/jobs/2489631
> [2] https://salsa.debian.org/med-team/ncbi-vdb/-/blob/master/debian/patches/fix_cmake.patch#L30
> --
> http://fam-tille.de

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