Re: CuteSV (Was: PyEnsembl - how does that help us?)
Am 24.05.21 um 00:36 schrieb tony mancill:
> On Sun, May 23, 2021 at 11:36:43PM +0530, Nilesh Patra wrote:
>> On 5/23/21 10:00 PM, tony mancill wrote:
>>> On Sun, May 23, 2021 at 06:16:42PM +0200, Steffen Möller wrote:
>>>> https://salsa.debian.org/med-team/catfishq
>>>> is ready for review+sponsoring.
>>>> Many thanks!
>>> Hello Steffen, hi Debian Med@
>>>
>>> Since I have worked on the fastqc package in the past and am trying to
>>> increase my knowledge about FASTQ in general, I am planning to review
>>> catfishq and sponsor an upload.
>>>
>>> I am posting to try to avoid duplicated efforts and because many on the
>>> team are much faster than I am at reviewing and uploading... :)
>> The github (not pypi) repository for this contains test data, please consider adding that
>> and running autopkgtests on it, before uploading.
>> The data size is barely 8K, so it can directly to d/tests dir
> Hi Nilesh,
>
> I didn't see this until after I uploaded but I like the idea. We appear
> to be on the same wavelength! :)
>
> I used the file from github, but since the test data is tiny (21 bytes)
> and not a binary file, I didn't bother with a repack. It is included in
> debian/tests/ [1] and the source documented in debian/copyright [2].
>
>
> [1] https://salsa.debian.org/med-team/catfishq/-/commit/b74ea1c6a2cd5e7785de92389a354b5e01de6f33
> [2] https://salsa.debian.org/med-team/catfishq/-/commit/fc82fefbad239d5e86c0374896a3af72d2e90e2f
I have seen the upload - thank you both!
Should there be a bug report about the missing test data in the pypi
tarball?
Best,
Steffen
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