RE:Bug#936609: cblas / gsl hint needed (Was: Bug#936609: Ported ghmm to Python3 but issues with clapack)
- To: Andreas Tille <tille@debian.org>, "936609@bugs.debian.org" <936609@bugs.debian.org>, Alexander Schliep <alexander@schlieplab.org>
- Cc: Debian Med Project List <debian-med@lists.debian.org>, Debian Science List <debian-science@lists.debian.org>, "schliep@ghmm.org" <schliep@ghmm.org>, Benjamin Georgi <georgi@molgen.mpg.de>, Wasinee Rungsarityotin <rungsari@molgen.mpg.de>, "Ivan G. Costa" <costa@molgen.mpg.de>, Janne Grunau <grunau@molgen.mpg.de>, Matthias Heinig <heinig@molgen.mpg.de>
- Subject: RE:Bug#936609: cblas / gsl hint needed (Was: Bug#936609: Ported ghmm to Python3 but issues with clapack)
- From: PICCA Frederic-Emmanuel <frederic-emmanuel.picca@synchrotron-soleil.fr>
- Date: Thu, 17 Dec 2020 09:45:30 +0000
- Message-id: <[🔎] A2A20EC3B8560D408356CAC2FC148E5301BF024BA8@SUN-DAG3.synchrotron-soleil.fr>
- In-reply-to: <[🔎] 20201217090547.GF29771@an3as.eu>
- References: <E1i3bBI-0002uz-51@paradis.debian.org> <20190911153408.dpmvsudg6l35575m@an3as.eu> <20200105065505.GN12035@an3as.eu> <20200105081907.GA734296@Macadamia> <20200106115617.GX12035@an3as.eu> <20200127095525.GJ27204@an3as.eu> <[🔎] 20201205110954.GG31595@an3as.eu> <[🔎] 24523.39425.498408.684047@rob.eddelbuettel.com> <[🔎] 20201205155214.GH31595@an3as.eu>,<[🔎] 20201217090547.GF29771@an3as.eu>
Hello Andreas,
I just built ghmm by removing --with-gsl.
It seems that the gsl implementation of blas conflict with the one provided in atlas.
so --enable-gsl + --enable-atlas seems wrong...
+------------------------------------------------------------------------------+
| Summary |
+------------------------------------------------------------------------------+
Build Architecture: amd64
Build Type: binary
Build-Space: 39004
Build-Time: 31
Distribution: UNRELEASED
Host Architecture: amd64
Install-Time: 14
Job: /tmp/ghmm_0.9~rc3-3.dsc
Machine Architecture: amd64
Package: ghmm
Package-Time: 49
Source-Version: 0.9~rc3-3
Space: 39004
Status: successful
Version: 0.9~rc3-3
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