Re: fix for #966470: biobambam2 autopkgtest failures
Hi Étienne,
that was exceptional. Many thanks!
Yes, please close in the changelog whatever you can close.
Best,
Steffen
On 08.08.20 18:54, Étienne Mollier wrote:
> Control: tags -1 pending
>
> Good day,
>
> I had a look at the autopkgtest failure affecting biobambam2,
> and since these segmentation faults were showing up only in my
> autopkgtest environment, and not when using the package directly
> on my system, it felt like a missing dependency. So I trapped
> system calls issued by the `bamsormadup` command using `strace`
> within the run-unit-test script, and it turned out the program
> was searching for a libz.so library.
>
> After appending the zlib1g-dev package to dependencies of the
> biobambam2 package, the autopkgtest suite fully executes without
> errors. Changes are pushed on Salsa, available for review:
>
> https://salsa.debian.org/med-team/biobambam2
>
> As a side note I also updated the package to version 2.0.173, as
> it has been released lately, and cleaned an informational entry
> that was showing up in lintian. This should also unblock and
> resolve #966472; should it be mentioned through a "Closes"
> statement in the changelog ?
>
> Kind Regards,
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