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Re: marginphase ready for upload



Hi Shayan and Andreas,
I found a paper on marginphase which I've added to upstream/metadata.

I've also written a short description using excerpts from this paper and added it to d/control.
Hope this helps.

Regards,
Pranav

On Fri, Jul 3, 2020 at 3:23 AM Shayan Doust <hello@shayandoust.me> wrote:
Hello Andreas,

> I guess libsonlib needs to be uploaded to new first, right?
> Could you confirm its ready as well?

Yes, libsonlib is the only dependency in control that is not yet uploaded.

One test does segfault but this very much seems like a localised issue
with the test itself and not a fault with the library, so I will either
attempt to fix this some other time or raise this issue tomorrow with
upstream. Either way, we should try upload for now.

> Is there anybody who feels able to give a better long description?
> Its a bit short.  While I would not mind uploading I think its more
> helpful for users to get some more information given there are no
> real docs neither a publication.

The README is very much what is the description, and I can only
formulate this as being "haplotyping and genotyping" considering I'm not
in the medical field to write a description for it, so maybe someone can
attempt to figure out a bigger description.

> Did you found that program on any COVID-19 relevant list?  I
> would add it to the covid-19 task then.

More specifically found it on the Bio RPM/Deb COVID-19 Dependencies
spreadsheet on Google Docs.

Kind regards,
Shayan Doust

On 02/07/2020 22:05, Andreas Tille wrote:
> Hi Shayan,
>
> On Thu, Jul 02, 2020 at 05:42:38PM +0100, Shayan Doust wrote:
>> I believe marginPhase[1] is ready for a sponsored upload.
>
> I guess libsonlib needs to be uploaded to new first, right?
> Could you confirm its ready as well?
>
> BTW, I was seeking for some publication covering marginphase but failed.
> Since there is also no conda id I removed debian/upstream/metadata.
>
> Is there anybody who feels able to give a better long description?
> Its a bit short.  While I would not mind uploading I think its more
> helpful for users to get some more information given there are no
> real docs neither a publication.
>
> Did you found that program on any COVID-19 relevant list?  I
> would add it to the covid-19 task then.
>
> Kind regards
>
>       Andreas.

>> [1]: https://salsa.debian.org/med-team/marginphase
>
>

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