Re: Sepp : including a dataset?
Hi Andreas,
Le 07/10/2020 à 22:43, Andreas Tille a écrit :
> Hi Pierre,
>
> On Wed, Oct 07, 2020 at 10:30:34PM +0200, Pierre Gruet wrote:
>> I have almost finished the initial packaging of sepp [0]. Beside the
>> sepp program, upstream also provides the tipp program in the same
>> tarball. Basically, tipp classifies sequences using sepp and a
>> collection of alignments and placements data and statistical methods.
>> People installing tipp are invited to download a dataset (approx. 240Mo)
>> [1] which does not belong to the same Github repository and has no
>> license information inside it.
>>
>> Technically, I guess we might consider creating a sepp-data package with
>> those data, but I also imagine this is not really feasible if we don't
>> have much information about where those data come from, who collected
>> them, ...
>>
>> Based on your experience, would you have some advice on this? My
>> proposal is to let tipp aside and only focus on sepp, which is ready.
>
> If the data are not part of the source tarball it might be an option
> to provide both executables and add the documentation you are quoting
> above.
Thanks for the advice, this might be the most suitable idea then. I will
do so.
>
> Kind regards
>
> Andreas.
>
Best,
Pierre
>> [0] https://salsa.debian.org/med-team/sepp
>> [1] https://github.com/tandyw/tipp-reference/
>>
>>
>
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