r-bioc-biocneighbors also ready Re: And the Rcpphnsw R package, please Re: RFS: hnswlib

[Steffen Möller <steffen_moeller@gmx.de>]

Dear all,

all these packages depend on each other. The sequence bottom-up is

  hnswlib
  r-cran-rcpphnsw
  r-bioc-biocneighbors

Many thanks

Steffen

On 06.09.20 15:31, Steffen Möller wrote:

> salsa.debian.org:r-pkg-team/r-cran-rcpphnsw.git
>
> Many thanks again
>
> Steffen
>
> On 06.09.20 15:02, Steffen Möller wrote:
>> Hello,
>>
>> Please kindly have a look at
>>
>> git@salsa.debian.org:med-team/hnswlib.git /
>> https://salsa.debian.org/med-team/hnswlib
>>
>> which is one of the  dependencies of the pigx-scrnaseq workflow.
>>
>> This package ships a Python module in a subdirectory. I failed to pass
>> any "--dir" instructions to pybuild, so I was a bit creative and
>> added/removed symlinks to ../debian. This seems to do the job. If anyone
>> out there knows how to do this properly - much appreciated.
>>
>> The SingleCell tab on
>> https://docs.google.com/spreadsheets/d/1tApLhVqxRZ2VOuMH_aPUgFENQJfbLlB_PFH_Ah_q7hM/edit#gid=845223509
>> unrolls all (yet known) dependencies which were only roughly summarized
>> on the Virus tab. It does not look too bad.
>>
>> Steffen
>>
>>