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Re: New InVesalius upstream version (3.1.99994)



Hi Andreas

On Tue, Mar 3, 2020 at 5:58 AM Andreas Tille <andreas@fam-tille.de> wrote:
>
> Hi Thiago,
>
> On Mon, Mar 02, 2020 at 11:46:41AM -0300, Thiago Franco de Moraes wrote:
> > >
> > > commit 54645a18d87cca743a9ccadaca1c67d79ddfe27e
> > > Author: Andreas Tille <tille@debian.org>
> > > Date:   Mon Mar 2 10:56:15 2020 +0100
> > >
> > >     Seems 10_import_cython_modules.patch needs to be droped
> >
> > It's necessary. But pybuild was building before the creation of the cython files. I fixed that by overriding "override_dh_auto_configure". Now it's working correctly. Also, I needed to force GTK to use X11 because OpenGL in WXPython doesn't work in Wayland.
>
> OK, fine for me.  I do not know much about the internals.
>
> > > I've installed the build result and startet:
> > >
> > >
> > > $ LC_ALL=C invesalius3
> > > /usr/lib/python3/dist-packages/wx/lib/pubsub/__init__.py:25: wxPyDeprecationWarning: wx.lib.pubsub has been deprecated, plese migrate your code to use pypubsub, available on PyPI.
> > >   wx.wxPyDeprecationWarning)
> > > app.py:225: DeprecationWarning: Yield() is deprecated
> > >   wx.Yield()
> > > Could not import dl
> > > /usr/share/invesalius/invesalius/data/transformations.py:1899: UserWarning: failed to import module _transformations
> > >   warnings.warn("failed to import module %s" % name)
> > > Traceback (most recent call last):
> > >   File "/usr/lib/python3/dist-packages/wx/core.py", line 2228, in Notify
> > >     self.notify()
> > >   File "/usr/lib/python3/dist-packages/wx/core.py", line 3384, in Notify
> > >     self.result = self.callable(*self.args, **self.kwargs)
> > >   File "app.py", line 231, in Startup
> > >     from invesalius.gui.frame import Frame
> > >   File "/usr/share/invesalius/invesalius/gui/frame.py", line 27, in <module>
> > >     import invesalius.gui.default_tasks as tasks
> > >   File "/usr/share/invesalius/invesalius/gui/default_tasks.py", line 28, in <module>
> > >     import invesalius.gui.data_notebook as nb
> > >   File "/usr/share/invesalius/invesalius/gui/data_notebook.py", line 40, in <module>
> > >     import invesalius.data.slice_ as slice_
> > >   File "/usr/share/invesalius/invesalius/data/slice_.py", line 36, in <module>
> > >     from invesalius.data.mask import Mask
> > >   File "/usr/share/invesalius/invesalius/data/mask.py", line 33, in <module>
> > >     from . import floodfill
> > > ImportError: cannot import name 'floodfill' from 'invesalius.data' (/usr/share/invesalius/invesalius/data/__init__.py)
> > > Traceback (most recent call last):
> > >   File "/usr/lib/python3/dist-packages/wx/core.py", line 2228, in Notify
> > >     self.notify()
> > >   File "/usr/lib/python3/dist-packages/wx/core.py", line 3384, in Notify
> > >     self.result = self.callable(*self.args, **self.kwargs)
> > >   File "app.py", line 111, in Startup2
> > >     self.control = self.splash.control
> > > AttributeError: 'Inv3SplashScreen' object has no attribute 'control'
> > > Traceback (most recent call last):
> > >   File "app.py", line 255, in OnClose
> > >     if self.fc.IsRunning():
> > > AttributeError: 'Inv3SplashScreen' object has no attribute 'fc'
> > >
> > >
> > >
> > > Could you please re-check the current status in Git?
> >
> > This was fixed in my last commit
>
> Really?  Unfortunately this problem did not went away at my side? :-(
>
> I admit I'm running the program on a testing system.  So may be
> some versioned dependencies are missing?

Maybe your invesalius-bin package is old. I tried here in Ubuntu 20.04 and it's working. I'm trying to test in Debian Unstable (SId) and it's not installing because some InVesalius dependencies (like python3-vtk7) have Python3.7 as dependency and InVesalius has Python3.8 as dependency. I think Debian Unstable is in process of update Python3 packages to Python3.8. 

> Kind regards
>
>        Andreas.
>
> --
> http://fam-tille.de
Thansk!


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