BUG in ncbi-blast+
Hi,
While attempting to use NCBI "blastn" from behind a proxy, I traced the
execution of "blastn" to check if it was reading the default
"/etc/ncbi/.ncbirc" file where I put my proxy config in because it
wasn't working.
In fact, this file is never stat'ed or read:
ajt@beluga:~$ strace blastn |& fgrep .ncbirc
stat("./.ncbirc", 0x7fff8bbc0200) = -1 ENOENT (No such file or directory)
stat("/home/ajt/.ncbirc", 0x7fff8bbc0200) = -1 ENOENT (No such file or directory)
stat("/etc/.ncbirc", 0x7fff8bbc0200) = -1 ENOENT (No such file or directory)
stat("/usr/bin/.ncbirc", 0x7fff8bbc0200) = -1 ENOENT (No such file or directory)
My "~/.ncbirc" file is read correctly, so I'm using that instead.
Please let me know the proper way to report this BUG in med-bio?
Thanks,
Tony.
--
Minke Informatics Limited, Registered in Scotland - Company No. SC419028
Registered Office: 3 Donview, Bridge of Alford, AB33 8QJ, Scotland (UK)
tel. +44(0)19755 63548 http://minke-informatics.co.uk
mob. +44(0)7985 078324 mailto:tony.travis@minke-informatics.co.uk
Reply to: