Re: Bug#946272: ITP: libbio-procedural-perl -- Simple low-dependency procedural interfaces to BioPerl
Uploaded. Thanks for your work on this, Andreas.
On Sat, Dec 28, 2019 at 03:17:10AM -0700, Michael Crusoe wrote:
> Dear Andreas,
>
> I've fixed the tests for the libbio-db-embl-per and
> libbio-db-ncbihelper-perl packages.
>
> This also allows libbio-variation-perl to build successfully, in addition
> to libbio-procedural-perl.
>
> Therefore it would be appreciate if you could sponsor all four packages:
> libbio-db-embl-perl
> libbio-db-ncbihelper-perl
> libbio-variation-perl
> libbio-procedural-perl
>
> Many thanks!
>
> On Fri, Dec 6, 2019 at 11:58 PM Andreas Tille <andreas@an3as.eu> wrote:
>
> > Hi Michael,
> >
> > this needs libbio-db-embl-perl (and libbio-db-ncbihelper-perl but this
> > was mentioned in my other mail). I cloned libbio-db-embl-perl but this
> > ended up in build-time test errors:
> >
> > dh_auto_test
> > make -j4 test TEST_VERBOSE=1
> > make[1]: Entering directory '/build/libbio-db-embl-perl-1.7.4'
> > PERL_DL_NONLAZY=1 "/usr/bin/perl" "-MExtUtils::Command::MM"
> > "-MTest::Harness" "-e" "undef *Test::Harness::Switches; test_harness(1,
> > 'blib/lib', 'blib/arch')" t/*.t
> > t/00-compile.t ...........
> > 1..1
> > ok 1 - Bio/DB/EMBL.pm loaded ok
> > ok
> > t/author-mojibake.t ...... skipped: these tests are for testing by the
> > author
> > t/author-pod-coverage.t .. skipped: these tests are for testing by the
> > author
> > t/author-pod-syntax.t .... skipped: these tests are for testing by the
> > author
> > # No tests run!
> > t/EMBL.t .................
> > 1..16
> > 1..0 # Skipped: no host: www.google.com
> > Dubious, test returned 255 (wstat 65280, 0xff00)
> > Failed 16/16 subtests
> >
> > Test Summary Report
> > -------------------
> > t/EMBL.t (Wstat: 65280 Tests: 0 Failed: 0)
> > Non-zero exit status: 255
> > Parse errors: More than one plan found in TAP output
> > Bad plan. You planned 16 tests but ran 0.
> > Files=5, Tests=1, 1 wallclock secs ( 0.04 usr 0.01 sys + 0.29 cusr
> > 0.03 csys = 0.37 CPU)
> > Result: FAIL
> > Failed 1/5 test programs. 0/1 subtests failed.
> > make[1]: *** [Makefile:851: test_dynamic] Error 255
> >
> >
> > I wonder whether all the tests need internet and thus are bound to fail
> > and need to be ignored.
> >
> > Kind regards
> >
> > Andreas.
> >
> > On Fri, Dec 06, 2019 at 03:13:20PM +0100, Michael R. Crusoe wrote:
> > > Package: wnpp
> > > Severity: wishlist
> > >
> > > Subject: ITP: libbio-procedural-perl -- Simple low-dependency procedural
> > interfaces to BioPerl
> > > Package: wnpp
> > > Owner: Michael R. Crusoe <michael.crusoe@gmail.com>
> > > Severity: wishlist
> > >
> > > * Package name : libbio-procedural-perl
> > > Version : 1.7.4
> > > Upstream Author : Copyright: Ewan Birney <birney@ebi.ac.uk>
> > > * URL : https://metacpan.org/release/Bio-Procedural
> > > * License : Artistic
> > > Programming Lang: Perl
> > > Description : Simple low-dependency procedural interfaces to
> > BioPerl
> > > The code in this distribution focuses on simple low-dependency
> > procedural
> > > interfaces to BioPerl that don't require knowledge of BioPerl classes
> > and
> > > methods.
> > >
> > > Remark: This package is maintained by Debian Med team at
> > > https://salsa.debian.org/med-team/libbio-procedural-perl
> > >
> > >
> >
> > --
> > http://fam-tille.de
> >
> >
>
> --
> Michael R. Crusoe
--
http://fam-tille.de
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