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Re: Bug#946272: ITP: libbio-procedural-perl -- Simple low-dependency procedural interfaces to BioPerl



Dear Andreas,

I've fixed the tests for the libbio-db-embl-per and libbio-db-ncbihelper-perl packages.

This also allows libbio-variation-perl to build successfully, in addition to libbio-procedural-perl.

Therefore it would be appreciate if you could sponsor all four packages:
libbio-db-embl-perl
libbio-db-ncbihelper-perl
libbio-variation-perl
libbio-procedural-perl

Many thanks!

On Fri, Dec 6, 2019 at 11:58 PM Andreas Tille <andreas@an3as.eu> wrote:
Hi Michael,

this needs libbio-db-embl-perl (and libbio-db-ncbihelper-perl but this
was mentioned in my other mail).  I cloned libbio-db-embl-perl but this
ended up in build-time test errors:

   dh_auto_test
        make -j4 test TEST_VERBOSE=1
make[1]: Entering directory '/build/libbio-db-embl-perl-1.7.4'
PERL_DL_NONLAZY=1 "/usr/bin/perl" "-MExtUtils::Command::MM" "-MTest::Harness" "-e" "undef *Test::Harness::Switches; test_harness(1, 'blib/lib', 'blib/arch')" t/*.t
t/00-compile.t ...........
1..1
ok 1 - Bio/DB/EMBL.pm loaded ok
ok
t/author-mojibake.t ...... skipped: these tests are for testing by the author
t/author-pod-coverage.t .. skipped: these tests are for testing by the author
t/author-pod-syntax.t .... skipped: these tests are for testing by the author
# No tests run!
t/EMBL.t .................
1..16
1..0 # Skipped: no host: www.google.com
Dubious, test returned 255 (wstat 65280, 0xff00)
Failed 16/16 subtests

Test Summary Report
-------------------
t/EMBL.t               (Wstat: 65280 Tests: 0 Failed: 0)
  Non-zero exit status: 255
  Parse errors: More than one plan found in TAP output
                Bad plan.  You planned 16 tests but ran 0.
Files=5, Tests=1,  1 wallclock secs ( 0.04 usr  0.01 sys +  0.29 cusr  0.03 csys =  0.37 CPU)
Result: FAIL
Failed 1/5 test programs. 0/1 subtests failed.
make[1]: *** [Makefile:851: test_dynamic] Error 255


I wonder whether all the tests need internet and thus are bound to fail
and need to be ignored.

Kind regards

      Andreas.

On Fri, Dec 06, 2019 at 03:13:20PM +0100, Michael R. Crusoe wrote:
> Package: wnpp
> Severity: wishlist
>
> Subject: ITP: libbio-procedural-perl -- Simple low-dependency procedural interfaces to BioPerl
> Package: wnpp
> Owner: Michael R. Crusoe <michael.crusoe@gmail.com>
> Severity: wishlist
>
> * Package name    : libbio-procedural-perl
>   Version         : 1.7.4
>   Upstream Author : Copyright: Ewan Birney <birney@ebi.ac.uk>
> * URL             : https://metacpan.org/release/Bio-Procedural
> * License         : Artistic
>   Programming Lang: Perl
>   Description     : Simple low-dependency procedural interfaces to BioPerl
>  The code in this distribution focuses on simple low-dependency procedural
>  interfaces to BioPerl that don't require knowledge of BioPerl classes and
>  methods.
>
> Remark: This package is maintained by Debian Med team at
>    https://salsa.debian.org/med-team/libbio-procedural-perl
>
>

--
http://fam-tille.de



--
Michael R. Crusoe

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