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Re: Could not build salmon - rapmap interactions?!?

Hi Steffen,

On Thu, Sep 26, 2019 at 09:42:36PM +0200, Steffen Möller wrote:
> I got stuck while trying to get salmon to recompile and/or update to the
> new .14.1 version that is out. After some time I came to understand that
> the problem is the deep interaction of the salmon package with the
> rapmap source tree that apparently should be of the same version.

I can confirm that my understanding is the same: rapmap and salmon
should be the same version.

> Another problem is that unfortunate cmake beast of salmon. I got stuck -
> could someone please give it a shot?

I can also confirm that cmake configuration of salmon is really complex.
I will not find time for having a look before Mid-November.

Kind regards



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