HYPHY and tests
Hi all
This is a report for my HYPHY attempts the last two days as well as the
code which you can already see pushed in the master branch.
I am sorry for the non-daily communication but I feel still quite shy
and a bit insecure, as I need to complete something in order to show it!
Working on it though :)
Part 1 - Exploring HYPHYGTEST
My first step was to replicate some of the test suites inside Hyphy. In
order to do that I copied the SimpleAnalysis suite inside the tests and
configured them to run through autobuild.
Then I looked for every bf file in a loop and I run it with HYPHYMPI.
This was something I could sucesfully run as a manual test but the
result I am currently getting an error as follows (after running sbuild -s)
1 not fully installed or removed.
Need to get 1043 kB/18.2 MB of archives.
After this operation, 67.1 MB of additional disk space will be used.
Get:1 file:/tmp/autopkgtest.234rdm/binaries hyphy-pt 2.3.14+dfsg-1 [886 kB]
Get:2 file:/tmp/autopkgtest.234rdm/binaries hyphy-mpi 2.3.14+dfsg-1
[918 kB]
Err:3 https://cdn-aws.deb.debian.org/debian unstable/main amd64
libkrb5support0 amd64 1.17-2
404 Not Found [IP: 143.204.192.2 443]
Err:4 https://cdn-aws.deb.debian.org/debian unstable/main amd64
libk5crypto3 amd64 1.17-2
404 Not Found [IP: 143.204.192.2 443]
Err:5 https://cdn-aws.deb.debian.org/debian unstable/main amd64
libkrb5-3 amd64 1.17-2
404 Not Found [IP: 143.204.192.2 443]
Err:6 https://cdn-aws.deb.debian.org/debian unstable/main amd64
libgssapi-krb5-2 amd64 1.17-2
404 Not Found [IP: 143.204.192.2 443]
Err:7 https://cdn-aws.deb.debian.org/debian unstable/main amd64
libcurl3-gnutls amd64 7.64.0-3
404 Not Found [IP: 143.204.192.2 443]
E: Failed to fetch
https://cdn-aws.deb.debian.org/debian/pool/main/k/krb5/libkrb5support0_1.17-2_amd64.deb
404 Not Found [IP: 143.204.192.2 443]
E: Failed to fetch
https://cdn-aws.deb.debian.org/debian/pool/main/k/krb5/libk5crypto3_1.17-2_amd64.deb
404 Not Found [IP: 143.204.192.2 443]
E: Failed to fetch
https://cdn-aws.deb.debian.org/debian/pool/main/k/krb5/libkrb5-3_1.17-2_amd64.deb
404 Not Found [IP: 143.204.192.2 443]
E: Failed to fetch
https://cdn-aws.deb.debian.org/debian/pool/main/k/krb5/libgssapi-krb5-2_1.17-2_amd64.deb
404 Not Found [IP: 143.204.192.2 443]
E: Failed to fetch
https://cdn-aws.deb.debian.org/debian/pool/main/c/curl/libcurl3-gnutls_7.64.0-3_amd64.deb
404 Not Found [IP: 143.204.192.2 443]
E: Unable to fetch some archives, maybe run apt-get update or try with
--fix-missing?
autopkgtest [13:11:26]: ERROR: testbed failure: apt repeatedly failed to
download packages
E: Autopkgtest run failed.
Part 2 - Implement further
My plan was to include further suites inside the AUTOPKGTEST such as the
ones running automatically through AUTOIPKGTEST or if not all of them
(as while looking the way of building the HYPHYPKGTEST) I couldn't feel
that I could tackle this task at the moment, at least include some of
them and be able later to go further!
Thanks a lot for your input
Best
SH
Reply to: