[Date Prev][Date Next] [Thread Prev][Thread Next] [Date Index] [Thread Index]

HYPHY and tests



Hi all

This is a report for my HYPHY attempts the last two days as well as the code which you can already see pushed in the master branch. I am sorry for the non-daily communication but I feel still quite shy and a bit insecure, as I need to complete something in order to show it!
Working on it though :)

Part 1 - Exploring HYPHYGTEST

My first step was to replicate some of the test suites inside Hyphy. In order to do that I copied the SimpleAnalysis suite inside the tests and configured them to run through autobuild.


Then I looked for every bf file in a loop and I run it with HYPHYMPI. This was something I could sucesfully run as a manual test but the result I am currently getting an error as follows (after running sbuild -s)


1 not fully installed or removed.
Need to get 1043 kB/18.2 MB of archives.
After this operation, 67.1 MB of additional disk space will be used.
Get:1 file:/tmp/autopkgtest.234rdm/binaries  hyphy-pt 2.3.14+dfsg-1 [886 kB]
Get:2 file:/tmp/autopkgtest.234rdm/binaries hyphy-mpi 2.3.14+dfsg-1 [918 kB] Err:3 https://cdn-aws.deb.debian.org/debian unstable/main amd64 libkrb5support0 amd64 1.17-2
  404  Not Found [IP: 143.204.192.2 443]
Err:4 https://cdn-aws.deb.debian.org/debian unstable/main amd64 libk5crypto3 amd64 1.17-2
  404  Not Found [IP: 143.204.192.2 443]
Err:5 https://cdn-aws.deb.debian.org/debian unstable/main amd64 libkrb5-3 amd64 1.17-2
  404  Not Found [IP: 143.204.192.2 443]
Err:6 https://cdn-aws.deb.debian.org/debian unstable/main amd64 libgssapi-krb5-2 amd64 1.17-2
  404  Not Found [IP: 143.204.192.2 443]
Err:7 https://cdn-aws.deb.debian.org/debian unstable/main amd64 libcurl3-gnutls amd64 7.64.0-3
  404  Not Found [IP: 143.204.192.2 443]
E: Failed to fetch https://cdn-aws.deb.debian.org/debian/pool/main/k/krb5/libkrb5support0_1.17-2_amd64.deb 404 Not Found [IP: 143.204.192.2 443] E: Failed to fetch https://cdn-aws.deb.debian.org/debian/pool/main/k/krb5/libk5crypto3_1.17-2_amd64.deb 404 Not Found [IP: 143.204.192.2 443] E: Failed to fetch https://cdn-aws.deb.debian.org/debian/pool/main/k/krb5/libkrb5-3_1.17-2_amd64.deb 404 Not Found [IP: 143.204.192.2 443]

E: Failed to fetch https://cdn-aws.deb.debian.org/debian/pool/main/k/krb5/libgssapi-krb5-2_1.17-2_amd64.deb 404 Not Found [IP: 143.204.192.2 443] E: Failed to fetch https://cdn-aws.deb.debian.org/debian/pool/main/c/curl/libcurl3-gnutls_7.64.0-3_amd64.deb 404 Not Found [IP: 143.204.192.2 443] E: Unable to fetch some archives, maybe run apt-get update or try with --fix-missing? autopkgtest [13:11:26]: ERROR: testbed failure: apt repeatedly failed to download packages

E: Autopkgtest run failed.

Part 2 - Implement further

My plan was to include further suites inside the AUTOPKGTEST such as the ones running automatically through AUTOIPKGTEST or if not all of them (as while looking the way of building the HYPHYPKGTEST) I couldn't feel that I could tackle this task at the moment, at least include some of them and be able later to go further!


Thanks a lot for your input


Best
SH


Reply to: