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Re: Delly is on salsa Re: bcbio is on salsa



CWL documents go in /use/share/commonwl/

As per https://www.commonwl.org/v1.0/CommandLineTool.html#Discovering_CWL_documents_on_a_local_filesystem

mie., 11 iul. 2018, 10:27 Andreas Tille <andreas@an3as.eu> a scris:
On Tue, Jul 10, 2018 at 10:41:11PM +0200, Steffen Möller wrote:
> Delly is on the TODO list for bcbio (next to a few other tools that may
> be of interest to us). The packaging is lintian-clean and inspectable on
> https://salsa.debian.org/med-team/delly. I would not mind a review and
> if that individual can upload - please ;o)

I've fixed

I: delly source: quilt-patch-missing-description minimal_makefile.patch

and uploaded.

> Delly ships with a cwl description of itself. I found that remarkable.
> Do we have a policy where to store these files? I forgot. Michael?

Good question.  May be this should be documented in some README.Debian
of cwl package (or some better place?)

> Also interesting is the Dockerfile it ships. Somehow we need to do a bit
> more of marketing for all the -dev packages we offer also for biological
> software.

Feel free to do so. :-)

Kind regards

     Andreas.

--
http://fam-tille.de


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