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Re: python-biopython not moved to testing




On 11/30/2017 03:31 PM, Olivier Sallou wrote:
>
> On 11/30/2017 11:12 AM, Andreas Tille wrote:
>> On Mon, Nov 27, 2017 at 05:09:23PM +0000, olivier sallou wrote:
>>> Hi,
>>> I see that biopython has been patched to prevent removal, but it seems to
>>> be stuck in unstable
>>>
>>> 20 days old (needed 5 days)
>>> missing build on mips64el: python-biopython, python3-biopython (from
>>> 1.70+dfsg-2)
>>> old binaries left on all: python-biopython-doc, python-biopython-sql,
>>> python3-biopython-sql (from 1.70+dfsg-2) (but ignoring cruft, so nevermind)
>>>
>>> Seems to tests failed on mips64el and sparc64.
>>>
>>> result is package is still planned for removal (and biopython reverse
>>> depends).
>>>
>>> Tests were ok before (dsg-2) on those archs.
>>> should we try to manually build on a mips64 to check?
>> Have you asked for help on the according porters list?
> nope, I just saw the problem wondering what was wrong with biopython
> package status.
> I looked at logs, and it ends with a float division by zero. As it is
> python, and was working before, there should not be any arch specific
> issues, but....
>
>   File
> "/usr/lib/python3/dist-packages/reportlab/graphics/charts/axes.py", line
> 1350, in _calcStepAndTickPositions
>     i0 = int(float(valueMin)/valueStep)
> ZeroDivisionError: float division by zero
>
> issue may be in biopython or in its dependency (reportlab), need to find
> where the step calculation occurs.
I just did a test on eller.debian.org with a mips64el sid chroot and all
tests passed......
Maybe should only ask for a rebuild of package?

Olivier
>
>> Kind regards
>>
>>        Andreas.
>>

-- 
Olivier Sallou
Univ Rennes, Inria, CNRS, IRISA
Irisa, Campus de Beaulieu
F-35042 RENNES - FRANCE
Tel: 02.99.84.71.95

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