Should we package BioConductor TFBSTools? [Was [libtfbs-perl] 04/08: Add upstream's notice of deprecation to the package's description.]
Hi,
when reading this commit log: Should we package Bioconductor TFBSTools?
This would need at least a hand full of Bioconductor depencencies but
usually it is quite straightforward and can be easily done via
dh-make-R --team med --test run-unit-test
plus editing d/copyright a bit.
If my question is answered with "yes" are there any volunteers?
Kind regards
Andreas.
----- Forwarded message from Charles Plessy <plessy@moszumanska.debian.org> -----
Date: Sat, 21 Oct 2017 02:48:17 +0000
From: Charles Plessy <plessy@moszumanska.debian.org>
To: debian-med-commit@lists.alioth.debian.org
Subject: [libtfbs-perl] 04/08: Add upstream's notice of deprecation to the package's description.
This is an automated email from the git hooks/post-receive script.
plessy pushed a commit to branch master
in repository libtfbs-perl.
commit 26ca40e7df03f63e24c8cd86a504250c834becf0
Author: Charles Plessy <plessy@debian.org>
Date: Sat Oct 21 11:00:58 2017 +0900
Add upstream's notice of deprecation to the package's description.
---
debian/control | 4 ++++
1 file changed, 4 insertions(+)
diff --git a/debian/control b/debian/control
index fcbcefa..ca1aba1 100644
--- a/debian/control
+++ b/debian/control
@@ -39,3 +39,7 @@ Description: scanning DNA sequence with a position weight matrix
If you use TFBS in your work, please cite "Lenhard B., Wasserman W.W. (2002)
TFBS: Computational framework for transcription factor binding site analysis.
Bioinformatics 18:1135-1136".
+ .
+ Note: the TFBS perl module is no longer under active development. All the
+ functionality can be found in the TFBSTools Bioconductor package; users are
+ highly encouraged to switch. <http://bioconductor.org/packages/TFBSTools/>
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