Bug#812426: ITP: miniasm -- ultrafast de novo assembler for long noisy DNA sequencing reads

[Sascha Steinbiss <satta@tetrinetsucht.de>]

Package: wnpp
Severity: wishlist
Owner: Sascha Steinbiss <satta@tetrinetsucht.de>

* Package name    : miniasm
  Version         : 0.2
  Upstream Author : Heng Li <lh3@me.com>
* URL             : https://github.com/lh3/miniasm
* License         : MIT
  Programming Lang: C
  Description     : ultrafast de novo assembler for long noisy DNA sequencing reads

Miniasm is an experimental very fast OLC-based de novo sequence assembler
for noisy long reads. It takes all-vs-all read self-mappings (typically by
minimap) as input and outputs an assembly graph in the GFA format.
Different from mainstream assemblers, miniasm does not have a consensus step.
It simply concatenates pieces of read sequences to generate the final unitig
sequences. Thus the per-base error rate is similar to the raw input reads.

This software will be maintained by the Debian Med Packaging team.