Re: Packging jModelTest for Debian and versioning
Hi Andreas,
I have just released a new revision. There was no dependency on Netbeans library in jModelTest (that
was in ProtTest, instead). The new version allows for using the PhyML binary located at /usr/bin/phyml.
The changes are listed here:
https://github.com/ddarriba/jmodeltest2/blob/master/src/main/resources/CHANGELOG
Please let me know if there is anything else missing.
Thank you,
Diego.
On 14.01.2016 08:32, Andreas Tille wrote:
> Hi Diego,
>
> I think I forgot to CC you in my last mail. I wonder what the status of
> jmodeltest might be. Any estimation when we can expect a new version
> without netbeans dependencies?
>
> Kind regards
>
> Andreas.
>
> On Thu, Oct 29, 2015 at 09:54:26AM +0100, Andreas Tille wrote:
>> Hi Diego,
>>
>> On Mon, Oct 26, 2015 at 07:10:38PM +0100, Diego Darriba wrote:
>>> I added a new tagged revision after removing the dependency on ReadSeq.
>>
>> I checked this out and noticed that the BrowserLauncher is now the only
>> thing left for packaging to fullfill all prerequisites for jmodeltest.
>> I guess it is this project:
>>
>> http://browserlaunch2.sourceforge.net/
>>
>> right?
>>
>> BTW, I noticed that the build process is a bit picky about non-ASCII
>> characters. As I said I have no detailed experience with Java source
>> code but I needed to apply this patch
>>
>> https://anonscm.debian.org/cgit/debian-med/jmodeltest.git/tree/debian/patches/encoding.patch
>>
>> to enable building the source code. I agree that it is not really nice
>> to mix up proper Spanish names but lacking a better solution I went
>> for this one for the moment.
>>
>> Kind regards
>>
>> Andreas.
>>
>> --
>> http://fam-tille.de
>>
>>
>
Reply to: