One more: snpeff http://snpeff.sourceforge.net/download.html On Mon, Aug 22, 2016 at 5:36 PM, Michael Crusoe <michael.crusoe@gmail.com> wrote: Hello everyone, I'm at the H3Abionet Cloud computing hackathon this week in Pretoria, South Africa. http://www.h3abionet.org/training-and-education/h3abionet-courses/17-h3abionet-courses/h3abionet-courses-upcoming/266-h3abionet-cloud-computing-hackathon The resulting CWL tools and workflow descriptions will be contributed in real time to the community repository: https://github.com/common-workflow-language/workflows It would be super nice if I could get assistance making Debian packages of the following so we don't abuse Docker as a package manager :-) metagenomeSeq https://bioconductor.org/packages/release/bioc/html/metagenomeSeq.html phloseq https://github.com/joey711/phyloseq bamstats http://bamstats.sourceforge.net/ Cheers, -- Michael R. Crusoe Community Engineer & Co-founder Common Workflow Language project https://impactstory.org/u/0000-0002-2961-9670 michael.crusoe@gmail.com +40 720 781 765 +1 480 627 9108 -- Michael R. Crusoe Community Engineer & Co-founder Common Workflow Language project https://impactstory.org/u/0000-0002-2961-9670 michael.crusoe@gmail.com +40 720 781 765 +1 480 627 9108
Hello everyone, I'm at the H3Abionet Cloud computing hackathon this week in Pretoria, South Africa. http://www.h3abionet.org/training-and-education/h3abionet-courses/17-h3abionet-courses/h3abionet-courses-upcoming/266-h3abionet-cloud-computing-hackathon The resulting CWL tools and workflow descriptions will be contributed in real time to the community repository: https://github.com/common-workflow-language/workflows It would be super nice if I could get assistance making Debian packages of the following so we don't abuse Docker as a package manager :-) metagenomeSeq https://bioconductor.org/packages/release/bioc/html/metagenomeSeq.html phloseq https://github.com/joey711/phyloseq bamstats http://bamstats.sourceforge.net/ Cheers, -- Michael R. Crusoe Community Engineer & Co-founder Common Workflow Language project https://impactstory.org/u/0000-0002-2961-9670 michael.crusoe@gmail.com +40 720 781 765 +1 480 627 9108