Re: Request for sponsoring: beagle

[Afif Elghraoui <afif@debian.org>]

Hi, Dylan,

على السبت 26 آذار 2016 ‫11:55، كتب Dylan:
> Hi all,
> Could someone sponsor this new package [1] ?
>

Done.

> Package name: beagle
> URL: https://faculty.washington.edu/browning/beagle/beagle.html
> License: GPL3+
> Programming Lang: Java
> Description: Genotypic imputation that works on phased genotypes.
> Beagle performs genotype calling, genotype phasing, imputation of
> ungenotyped markers, and identity-by-descent segment detection.
> Genotypic imputation works on phased haplotypes using a Li and
> Stephens haplotype frequency model. Beagle also implements the Refined
> IBD algorithm for detecting homozygosity-by-descent (HBD) and
> identity-by-descent (IBD) segments.
> 

This looks great to me. There may be an issue with the pdf manual not
being built from source (although the source is probably a docx file),
but we'll see what the archive masters say.

Thanks and regards
Afif

-- 
Afif Elghraoui | عفيف الغراوي
http://afif.ghraoui.name