Package libsis-jhdf5-java is complete
- To: olivier sallou <olivier.sallou@gmail.com>
- Cc: Debian Med Project List <debian-med@lists.debian.org>
- Subject: Package libsis-jhdf5-java is complete
- From: Tim Booth <avarus@fastmail.fm>
- Date: Fri, 21 Aug 2015 12:41:03 +0100
- Message-id: <[🔎] 1440157263.29524.36.camel@wllt1771.nerc-wallingford.ac.uk>
- In-reply-to: <CAEwx8oQji7GCGPGnh9=BzMQYyQfLJh=KfPTEUJhi4r90oS=k0A@mail.gmail.com>
- References: <20150813094743.GS13839@sym.noone.org> <55CC73FD.1080200@ethz.ch> <20150813105756.GK13022@an3as.eu> <55CD04B6.7000705@ethz.ch> <CAEwx8oROzJsUpZeAECPSo=T78pCtjW8O+F6oipa-NQTL-zasyA@mail.gmail.com> <20150816082414.GC18749@an3as.eu> <CAEwx8oS19t5qrd+ZiiSjVW9Xv+d4+9J6_h-i_pU-NKaSzFA-Ww@mail.gmail.com> <CAEwx8oQji7GCGPGnh9=BzMQYyQfLJh=KfPTEUJhi4r90oS=k0A@mail.gmail.com>
Hi Olivier,
Following a bit more tinkering with the tests over the last couple of
days, I now have a package for libsis-jhdf5-java that I think is
complete and ready for use with FastQC etc. I have committed all my
work to SVN.
I got sidetracked by the tests in sourceTest/java/test but then I
realised that three of these fail even when using the fully pre-built
bundle .jar from upstream.
I think the only tests we actually care about are in sourcetest/java/ch
and run by invoking TestNG on the supplied test.xml file. Then the only
remaining trick was to override $TZ to force use of Zurich time zone,
and now they all pass for me.
Could you please confirm this also looks good on Sid?
Cheers,
TIM
On Sun, 2015-08-16 at 09:34 +0000, olivier sallou wrote:
>
>
> Le dim. 16 août 2015 à 11:23, olivier sallou
> <olivier.sallou@gmail.com> a écrit :
>
> Le dim. 16 août 2015 à 10:24, Andreas Tille <andreas@an3as.eu>
> a écrit :
>
> Hi Olivier,
>
> On Sun, Aug 16, 2015 at 06:41:58AM +0000, olivier
> sallou wrote:
> > This concerns
> sourceTests/java/ch/..../UnixTests.java with tests
> like:
> >
> > assertEquals("No such file or directory",
> Unix.getLastError()).
> >
> > There might be others.
> >
> > On my computer, I had a French message.
>
> Wouldn't it be better to set LC_ALL=C before running
> the test suite?
> does not work better
>
>
> Sorry, bad syntax... it works :-)
> Kind regards
>
> Andreas.
>
> --
> http://fam-tille.de
--
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is. If I am ignorant about a phenomenon, that is a fact about my state
of mind, not a fact about the phenomenon; to worship a phenomenon
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